Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3351 ATGGCTGCTGCTGATGTTGAGTACCGTTGCTTCGTTGGTGGTCTCGCCTGGGCCACTGATAACGAAGCCCTCGAGAAAGCCTTCTCTCAGTACGGCGAGATCGTTGAATCGAAGGTTATCAACGATCGCGAGACCGGAAGATCTAGAGGTTTCGGATTTGTTACCTTCGCTTCTGAGCAATCGATGAGGGAGGCGATCGAGGCCATGAACGGCTCCAACCTAGACGGCCGTAACATCACCGTGAACGAGGCTCAGTCCCGTGGCGGTGGTGGTGGAGGTGGAAGAAGCGGTGGCGGCGGTGGCTACGGAGGCGGTGGCGGATTCAGCCGTGGTGGAGGCGGATACGGTGGAGGCGGAGGTGGATACGGTGGAGGTGGCCGCCGTGAAGGTGGTTACAACAGAAGCGGTGGTGGTGGTGGTGGTTACGGTGGTGGTGGTGGTTATGGAGGTGGCAGGGACCGTGGATATGGTGACGGTGGATCTCGTTACTCTAGAGGTGGCGGTGACTCTGATGGAAACTGGAGGAACTAG 531 0.5857 MAAADVEYRCFVGGLAWATDNEALEKAFSQYGEIVESKVINDRETGRSRGFGFVTFASEQSMREAIEAMNGSNLDGRNITVNEAQSRGGGGGGGRSGGGGGYGGGGGFSRGGGGYGGGGGGYGGGGRREGGYNRSGGGGGGYGGGGGYGGGRDRGYGDGGSRYSRGGGDSDGNWRN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3351 176 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 134 - -
Aev04g3351 176 SMART rrm1_1 9 82 IPR000504 GO:0003723
Aev04g3351 176 Gene3D - 1 123 IPR012677 -
Aev04g3351 176 MobiDBLite consensus disorder prediction 74 176 - -
Aev04g3351 176 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Aev04g3351 176 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Aev04g3351 176 SUPERFAMILY RNA-binding domain, RBD 8 143 IPR035979 GO:0003676
Aev04g3351 176 PANTHER GEO13361P1-RELATED 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3351 Aev-Chr4 32331995 32335578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3351 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 36.709 2.05e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3351 - K13195 lja:Lj1g3v2296520.2 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3351 04 32331995 32335578 Aev04g3351 04 32331995 32335578 ECH