Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3349 ATGTTGATTTCATGTCAAAAATGCAACCTTTACCTTCTTCTTCCATGTTCCTCTGTACCCTTCCAATCCAACAAGTCCCTCACCGCTTCCACCATTCTTAGCTGCCAAAACCCACATGAGAATCATCACCACCAACCCATTCTCCGCAAACATAATTCAAAATCCACCACCTTTCTCCTTCATAATCTTTCCCATAACAACCAGCAACAACTAAGTGCTCCAAAACCCAGTGACCTTGAAGACCCCATGATGCCCCATGAAGAAAAGGTGAAGCTTTTGGAGCTTTCACTTGTGAGAAAAAGGACCCCTCAATTCCCTGGCTCCATCTATGTTCAGTCCCCTAGTGACCCTGATGTGGGTTCTTCTCTTCCACCTATAAGAACCCTTTTTCAACCAAGTGCTGAAACTGATGGTGATGATGATGATCATGGACATGGTCATGCCCATGATGATGTGGATGATGAGATGATAATGCGTGCCATTGAGATTAGGAGGAAGGTGACCGTGGAAATCTTCAAAGAAGCCATGAAAAAGGGCAAGTTTGGAATTACTTATAGTACTAACTTGGTTAATAGGTTGCAAGGTTTCATTGACTATGTCATGATTGAAGCTGCTAACTTGAAAAGGTTGCCAGAATATTCTAACTCCAGCTTCAATTTGCGCGCCAAAACCGTCATTGAGGACTCTGAGGTTGTGCCACTTATCAGATGGTTGAAGCATAATGAAGTATCCTATCCTCAGATATCAAAGCTCATATTGATGTCAAGAGGAAAAATTGAGTCCATAAGGAACCGTATTGAGTGGTTGAAGTCGATACATGTGAAAGGGGAGTTTCTTGGGTATGCACTTGTGAAGGCCGGAGAGAATATTTTGCAGCGCAGCAATGAGGAACTAGATGAGATTGTCGAGTATTTGGAGTCCAACGGAGTCAGGATGGAATGGATGGGTTATGTCATGAGTCGATGTCCACAACTGTTGTCCTACAGCTTAGAAGAATTGAAGACTCGTGTGGCGTTCTATTTAGATATGGGTTTGAATGAGAATGATTTTGGCACAATGGTTTTTGATTTTCCTAAAGCACTTGGTTACTTTACTCTTGAAGAAATGTACCAAAAGGTTAATTACTTGAAAGAATTTGGGCTTCAAAATGAGGATGTTGGCAAATTGCTAGCATTTAGGCCACAATTGATGGGATGCAGCATTGAAGAACAATGGAAACCTCTTGTTAAGTATTATTACTATCATGGAATCACCCGAGATGGCATGAGGAAAATGCTTATCCATAAACCAATAGTCTTTTGCACTGACTTGCAGATTAATGTTGTCCCAAAGGTGAAGTTTTTTCAGGACATAGGGGTTCAAGAGGATGCAATTGGCAACATGCTTGTAAAGTTTCCTAATGTACTCACTTACAGCCTCCACAAGAAGATTAGGCCAGTGGTAATATTCTTGATGACGAAAGCCGGAGTCAGCGACAAAGATATCGGCAAGGTCGTAGCTCTGGGACCTGAGCTCTTGGGATGCAGCATTGTACACAAGCTTGATCTGAATGTAAAATATTTTTTGTCTCTCGGGATACGACAGAAGCAACTGGGCGAGATGGTTGCTGATTTCCCATTGCTGCTCAGATACAATCCCAATGTCCTTCGTCCCAAATACGTTTATCTGCGGAGAACCATGGTCCGGCCGTTGCAAGATATCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAAGGGAGAATTATCCCAAGACACAAGGTTCTTGTGGAGAATCAGATTAATATTAAGCTGAGATACATGTTGGCTAGCACTGATGAACAATTCAAGAAATTGGTTAATGCTTTGATCAGAAAGCGCCAGAAATTTGAATCTGGTGTCATGGAGGATACTGAACTCGAATCTGTTATTCCAGATGATATAATTACACCTCCAACATGTACATGA 1947 0.4176 MLISCQKCNLYLLLPCSSVPFQSNKSLTASTILSCQNPHENHHHQPILRKHNSKSTTFLLHNLSHNNQQQLSAPKPSDLEDPMMPHEEKVKLLELSLVRKRTPQFPGSIYVQSPSDPDVGSSLPPIRTLFQPSAETDGDDDDHGHGHAHDDVDDEMIMRAIEIRRKVTVEIFKEAMKKGKFGITYSTNLVNRLQGFIDYVMIEAANLKRLPEYSNSSFNLRAKTVIEDSEVVPLIRWLKHNEVSYPQISKLILMSRGKIESIRNRIEWLKSIHVKGEFLGYALVKAGENILQRSNEELDEIVEYLESNGVRMEWMGYVMSRCPQLLSYSLEELKTRVAFYLDMGLNENDFGTMVFDFPKALGYFTLEEMYQKVNYLKEFGLQNEDVGKLLAFRPQLMGCSIEEQWKPLVKYYYYHGITRDGMRKMLIHKPIVFCTDLQINVVPKVKFFQDIGVQEDAIGNMLVKFPNVLTYSLHKKIRPVVIFLMTKAGVSDKDIGKVVALGPELLGCSIVHKLDLNVKYFLSLGIRQKQLGEMVADFPLLLRYNPNVLRPKYVYLRRTMVRPLQDIIEFPRFFSYSLEGRIIPRHKVLVENQINIKLRYMLASTDEQFKKLVNALIRKRQKFESGVMEDTELESVIPDDIITPPTCT* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3349 648 Gene3D Transcription termination factor 3, mitochondrial 392 623 IPR038538 -
Aev04g3349 648 MobiDBLite consensus disorder prediction 108 152 - -
Aev04g3349 648 Pfam mTERF 254 436 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 Pfam mTERF 368 610 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 423 454 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 564 595 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 351 382 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 496 527 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 316 346 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 532 562 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 387 418 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 SMART mt_12 459 491 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 69 633 - -
Aev04g3349 648 PANTHER CGI-12 PROTEIN-RELATED 69 633 IPR003690 GO:0003690|GO:0006355
Aev04g3349 648 MobiDBLite consensus disorder prediction 134 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3349 Aev-Chr4 32312244 32315239 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev04g3349 mTERF 4.3e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3349 K15032 - zju:107426883 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3349 04 32312244 32315239 Aev04g3349 04 32312244 32315239 ECH