Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3317 ATGGAAGATTACGGGAGCAGCGACGACGATTATCGGTACTCCGATCAGGACGAAGATGACTCCGTCGACGCTTTTGACAACGACGACAACGATTTCCAATTGGTCCCTTCCAAGGGTCCCTCTACCCAGGTGATTACGCAGGAATCACTTCTAGCTGCACAGAAAGAGGATTTGCGCAGAGTGATGGACATGCTGTCAGTGAGGGAGCAACATGCGCGTACCCTGCTTATTTATCACCGTTGGGATGTGGAGAAGTTGTTTGCGGTGTATGTAGACAAGGGAAAACAATATCTATTTGCTGAAGCTGGGGTTACTGTGGATGATCACCATGACTCTGAATCATCTTCAGTTCCTTCTACAATACTGTGCGAAATCTGCTACGACGAGATTCCTAGTAATGAAGCAACAAGAATGGACTGTGGTCACTGTTATTGCAACAGCTGTTGGACAGAGCATTTTATTGTGAAGATAAAAGAGGGTCAAAGTAAACGTGTCAGATGCATGGCACACAAATGCTATTCAATCTGTGATGAAGCTGTTGTAAGAACTTTACTCAGCAAAGAGCACCCTGATATGGCAGAGAAATATGAACGGTTTCTTCTTGAGTCCTATATTGAAGACAATAAGAGAGTTAAATGGTGTCCAAGCACACCTCATTGCGGGAATGCAATACGAGTGGAGGACGATGAGTTATGTGAAGTAGAATGTTCATGTGGTCTACAATTTTGTTTTAGCTGTTTGTCAGAAGCACACTCCCCTTGTTCATGTTTGATGTGGGAGCTTTGGGCCAAGAAGTGTCGTGATGAATCAGAAACTGTAAATTGGATAACAGTTCATACAAAACCTTGTCCAAAATGCCACAAACCGGTGGAGAAAAATGGTGGTTGTAACTTGGTTAGCTGTATCTGTGGTCAAGCATTTTGTTGGTTATGTGGGGGAGCCACTGGACGAGAGCATACTTGGTCAAGTATAGCTGGTCATAGCTGTGGTCGCTACAAAGAACAAGAAAAAACAGCTGAACGGGCAAAGCGGGATCTCTATCGGTATATGCATTATCATAACCGTTATAAAGCTCACACAGACTCTTTTAAGCTCGAAAGTAAACTGAAAGAGAATATAGAGGGGAAGATTGCTGTTTCAGAAGAAAAAGATTCTACACTCAGAGATTATAGTTGGGTAAATAATGGACTCTCTAGGCTTTTCAGATCTAGGCGTGTCCTATCATATTCGTATGCATTTGCGTTTTACATGTTTGGAGATGAGCTTTTTAAGGACGAAATGACAGAAGCTCAAAGGGAAATAAAGCAGAACTTATTTGAGGATCAACAGCAGCAGCTTGAGGCAAATGTTGAAAAGCTCTCTAAAATTTTGGAGGAGCCTTTTGAAACCTTTGCAGATGATAAGGTTATGGAGATAAGGATGCAGATAATCAATCTGTCGACCATTATTGATAAGCTCTGTCAAAAGATGTACGAGTGCATCGAGAATGATTTACTGGGTTCTCTCCATCTTGGCGTTCACAGTATAGCTCCATACAAGTCTAAGGGCATAGAGAGGGCTTCCGACCTTTCTGTTTGGCTGGCCAATAAAGCTGTTAATACTGGTGTAACGGCAGAAATCGATAGACCTTCTGGATCCGGTAGCTCAGATGACAGTGGATGCCCTTCCCGGAAGCGTGCTAGGAAAGAGGGTATCGGAGGAGGTAGTGGTAGTGACGGCGGCTTTTTTGATCTAAACGTGCCAGCAGAGGTTGTAGACAGAAATTGA 1767 0.4335 MEDYGSSDDDYRYSDQDEDDSVDAFDNDDNDFQLVPSKGPSTQVITQESLLAAQKEDLRRVMDMLSVREQHARTLLIYHRWDVEKLFAVYVDKGKQYLFAEAGVTVDDHHDSESSSVPSTILCEICYDEIPSNEATRMDCGHCYCNSCWTEHFIVKIKEGQSKRVRCMAHKCYSICDEAVVRTLLSKEHPDMAEKYERFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDELCEVECSCGLQFCFSCLSEAHSPCSCLMWELWAKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSIAGHSCGRYKEQEKTAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKENIEGKIAVSEEKDSTLRDYSWVNNGLSRLFRSRRVLSYSYAFAFYMFGDELFKDEMTEAQREIKQNLFEDQQQQLEANVEKLSKILEEPFETFADDKVMEIRMQIINLSTIIDKLCQKMYECIENDLLGSLHLGVHSIAPYKSKGIERASDLSVWLANKAVNTGVTAEIDRPSGSGSSDDSGCPSRKRARKEGIGGGSGSDGGFFDLNVPAEVVDRN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3317 588 SUPERFAMILY RING/U-box 119 206 - -
Aev04g3317 588 SMART ibrneu5 194 256 IPR002867 -
Aev04g3317 588 SMART ibrneu5 264 329 IPR002867 -
Aev04g3317 588 MobiDBLite consensus disorder prediction 539 553 - -
Aev04g3317 588 CDD RING-HC_RBR_TRIAD1_like 123 172 - -
Aev04g3317 588 ProSiteProfiles Zinc finger RING-type profile. 123 171 IPR001841 -
Aev04g3317 588 Pfam IBR domain, a half RING-finger domain 194 256 IPR002867 -
Aev04g3317 588 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 518 IPR031127 GO:0004842|GO:0016567
Aev04g3317 588 Gene3D - 252 499 - -
Aev04g3317 588 SUPERFAMILY RING/U-box 264 321 - -
Aev04g3317 588 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 209 IPR013083 -
Aev04g3317 588 SUPERFAMILY RING/U-box 194 262 - -
Aev04g3317 588 MobiDBLite consensus disorder prediction 1 41 - -
Aev04g3317 588 MobiDBLite consensus disorder prediction 1 27 - -
Aev04g3317 588 Pfam Ariadne domain 333 588 IPR045840 -
Aev04g3317 588 ProSiteProfiles TRIAD supradomain profile. 119 333 IPR044066 -
Aev04g3317 588 MobiDBLite consensus disorder prediction 538 588 - -
Aev04g3317 588 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3317 Aev-Chr4 32114882 32119350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3317 62 523 ARIADNE family AT2G16090 73.763 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3317 K11968 - gmx:100783343 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3317 04 32114882 32119350 Aev04g3317 04 32114882 32119350 ECH