Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3306 ATGATGATGAAGATGAAGATGAAGATGAAGATGATGCCACCATCTCCCTCTCCCTCTCCTTCCCCCGTGGTCAACAAGTCAACGCTACAATCTCCACCGCCCTCCAAATTACCGGTGGACTTCAGCCCTCCCTTGATTGCAATGGTCGTTGTCGTCGCCGCCGCCTTTCTCATTGTCACCTATTCCCGCCTCATCTCCCGCCACCTAACTCCCCCAATCCACCGTCTTATCCGCCGCATACGCCGCCGTCGACGCCGCGCACGCTCGCTTCTTCCCTCCTCCTCCGGCGACTTGGATTCCCTCCCTTATTACGACTCCCCTTTCGATGGGAACCTCCAAACGACGTCGTTTTCGCCTTACGGCCTCGACGACTCCGTCATCAAGACCATACCTTTCTCCCTCTACGCTGCCGCCTACGACGGCAATAACAACTCCTCACGCTCCTCCGCCTCCTCTCGCCGTGACTGCGCCGTTTGCCTCTTCGAATTCGAAGACGACGATTACGTCAGAACGCTACCTATTTGCTCTCACACGTTCCACGTTGATTGCATCGACGCCTGGCTCCGTTCTCACGCCAATTGCCCTCTCTGCCGTGCCGGAGTTCTCTCCGCCGCGTCGCCGTTCACTCCGATGTTCGCCGCCAGGATCCGCCCGAGCCTTGACGACGACGATACCATATTCCACCGCATCGCGGAGGATCATCATATTCCGGCAGAGGATCGCCATGCTCCGGTGGCGGAGATCACGGTGGAGGTGCCGCCGCTGCCGGAGGAGAGGTTCAACGGGAGGGACTTCCTGTTGAAGAGGTCGTATTCGTTCGGGTTCGAGAGGAGCTCGGCGTCGGAGAGGATGATGGTTATGGAACCGGCGACGGCGTCGCCGTGGCGGTACCGGAGAGGTAGTAGCAGCAGCAGCTTCTGGAGCAAGAGGCCTTCACCTTTTGGGTCTATAGGGAAGCCGAGAGTATTCTCTTTCAGGTACTATAGAGGGATGAAGTCGCCGTTTTTTCGCCGGAGAGGGTTTTTCCCGTTGTCGGAATCAAGCATGAGGTACGGCGGCATCGGCGGAGGGAGCTCGTCGCGGCGGAGCAAATCAATCGCTAGCCCAATGTTTCTGAGGTCGTCGGTTTTATCATCCACGGTGGCGGGCACGGCGGCGTTCTCGTCTAGCCGCCTAAGGTGCGGCGATCCAGAAGCGTTGCTGTCGCCGGAGAGGTTCAACAGAAGATGA 1230 0.5846 MMMKMKMKMKMMPPSPSPSPSPVVNKSTLQSPPPSKLPVDFSPPLIAMVVVVAAAFLIVTYSRLISRHLTPPIHRLIRRIRRRRRRARSLLPSSSGDLDSLPYYDSPFDGNLQTTSFSPYGLDDSVIKTIPFSLYAAAYDGNNNSSRSSASSRRDCAVCLFEFEDDDYVRTLPICSHTFHVDCIDAWLRSHANCPLCRAGVLSAASPFTPMFAARIRPSLDDDDTIFHRIAEDHHIPAEDRHAPVAEITVEVPPLPEERFNGRDFLLKRSYSFGFERSSASERMMVMEPATASPWRYRRGSSSSSFWSKRPSPFGSIGKPRVFSFRYYRGMKSPFFRRRGFFPLSESSMRYGGIGGGSSSRRSKSIASPMFLRSSVLSSTVAGTAAFSSSRLRCGDPEALLSPERFNRR* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3306 409 MobiDBLite consensus disorder prediction 1 35 - -
Aev04g3306 409 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 14 377 - -
Aev04g3306 409 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 14 377 IPR044675 -
Aev04g3306 409 SMART ring_2 156 197 IPR001841 -
Aev04g3306 409 SUPERFAMILY RING/U-box 155 204 - -
Aev04g3306 409 CDD RING-H2_PA-TM-RING 155 198 - -
Aev04g3306 409 Pfam Ring finger domain 155 198 IPR001841 -
Aev04g3306 409 ProSiteProfiles Zinc finger RING-type profile. 156 198 IPR001841 -
Aev04g3306 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 202 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3306 Aev-Chr4 32073431 32074660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3306 38 409 C3H Transcription Factor Family AT3G18930 53.165 1.67e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3306 - K19041 gmx:100795347 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3306 04 32073431 32074660 Aev04g3306 04 32073431 32074660 ECH