Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3291 ATGAAAGAAGAAATTGTACTGTTCTCAAAGCAGGGGAAAAAACCAGAGGAGGGTCAATGTCTAAGGCCAAGTTCTCCGGTGATGAAACCTTTACTTTTCTATATGTTAATGGATGCATCCTCTATCCTAGAAAAGAAGCTGAGGGTTCCGAATAAGTTGATGAAAAAATGCAGAGATAAACTCCCGGCTTTTGTTACTCTTGTTCTCCCCAATGGCAATGATTGGTTAGTTAGATTGACAGTACTTGATGACAAGTTGTGGTTTACTGATGGTTGGGGTGAATTCGTCGTCCGCTACACTATTTGTGTGGGATCACTTCTTGTCTTCAAATATGAAGGAGACTCAATTTTTGGAGTCAGCATATTCAATTTGAAATCTTATGAGGTAGATTACATAGAGAAGCCTAAAGCTGAAGGACAAGAAAAGCAATTCTCAGCTTCACATGGAAAAGAAAAAGAAACCGAAAATAGTTGCTGCCCTCCGAGCCTAGATGGTGCTGTTGGAAACAATGTTTCCAAAGGAGTTCTAGATCAAAAGATGCTTTGTAGAAACTGCATTGACACTCTGAACTCGATGAGTAATATTGATAGCAATGATGTGTTTCTAACCAAGGATGCAGATAATAGCCGAATAAGACCACAATCGACACGCGATGTTGGTATTCAAGTCAATGGAAGTGAGATCGACGGAGAACAATTGAATAAGCATGCAGACATCAAGAAAACGAAGAAAAGGAAAGAAAGAAGTGAGCCTTCAAATCTTGTGAAAGCGATGAAAATTCCGAGAAAACTGTCACTGATGGAGCGTTTGGCGAGCCTCGGGTCAACTCCAGAAAGGGAGAGAACAGTTCAATCAGCCGAAAAGTTTAACCCTAGTAATCCACATTGCAAAATCATCATGAGACCTTCCTTCGTTTCAAGCAAGTGTTTGCATATACCCACTAAGTTTTCATCAAAATATCTGAGTGAGATATCAGAGCTTGTAACACTTGAAGATTCCAATGGAAAACAATGGCGTGTTCGATCCGTTATTCATCGGCAATCAAGGAAACTAAGCCAGGGCTGGGGCCAATTTGTGAGGGATAACCATGTAAAGGAAGGCGATGTTTGTGTGTTCGAGCTTATGGATAAGAAGAAAGTTGTGCTCAAGATGACTACATCATCCAAGCCACCTTCATTCTTCAAAGTCTTCTATTCAGATTCAAGCTCTGAAAGATTGCAAATACCAAATGCTTTTGTGGCATTGACAGGTTTGAGAGAAAGGGTAGGTGTTGAATTCATCCTTAGAAATGATAGAGGGAGAGATTGGAGGGTTAAGACAAGTTGCATAGGAGGCAGAGTATTTTTTGAAGATGGTTGGGGAAGGTTTGTTGAAGAGAATACTCTAAAGAATAGAGACTTTATTGTTTTTCAATCTGAGATTGGAAGCAGGAATTTGTTTAAGTTCACAATCTTTGAACTTTCATCGTGGTGTGAAAAGTCTGAGGTCAAGGTGGAGGAGGAGGAGGAGGAGGGTGAAGAAGATATAGGTGATGATGATGATGATGAAGACGACAGTGAGTATGTTTATGAAGAAGGAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGATGATGATGATGATGTTGAGATGGAGGAGGAGGAGGACCCTATAGCTGACAAAGCATCTGATATCAGAAAAAAGGGCACTGCTAGAGGTTCTGGCTCCAAGGCTGATTCAGATCATCTTCATGAGTATGGAGCTATTGCAGAAAAGTATTTCTTTCACAGAGACAATCCATACTTTGTTGCAAAAACAATCAAAGACAGAGAAAATGAATTGCATATTCCATATAATATCATAAACGATTTCTCCCTCAACTTGCCAGAAACTATTACCCTATGGTGTCAGTATATTGATATCAGTTCAGAAGAACAGATCAAAACCCGCAAGAGTCGTTGGACTGATACAGGAAAATTGCACAGATGGAAAGATGGTCGTGTGTGCATCAAAGGGTGGTCAGCATTTTGCAGGAAGAACAAGATTGAAGACACTGATAGATGCATCTGTGAAATTGTGTTGGGGGAAGAGGCTAGAGTAGAAATGTTACAGGTTCATGTTGTTAGGAAACAATTTTAG 2127 0.3996 MKEEIVLFSKQGKKPEEGQCLRPSSPVMKPLLFYMLMDASSILEKKLRVPNKLMKKCRDKLPAFVTLVLPNGNDWLVRLTVLDDKLWFTDGWGEFVVRYTICVGSLLVFKYEGDSIFGVSIFNLKSYEVDYIEKPKAEGQEKQFSASHGKEKETENSCCPPSLDGAVGNNVSKGVLDQKMLCRNCIDTLNSMSNIDSNDVFLTKDADNSRIRPQSTRDVGIQVNGSEIDGEQLNKHADIKKTKKRKERSEPSNLVKAMKIPRKLSLMERLASLGSTPERERTVQSAEKFNPSNPHCKIIMRPSFVSSKCLHIPTKFSSKYLSEISELVTLEDSNGKQWRVRSVIHRQSRKLSQGWGQFVRDNHVKEGDVCVFELMDKKKVVLKMTTSSKPPSFFKVFYSDSSSERLQIPNAFVALTGLRERVGVEFILRNDRGRDWRVKTSCIGGRVFFEDGWGRFVEENTLKNRDFIVFQSEIGSRNLFKFTIFELSSWCEKSEVKVEEEEEEGEEDIGDDDDDEDDSEYVYEEGEEEEEEDDDDDDDDDDDDVEMEEEEDPIADKASDIRKKGTARGSGSKADSDHLHEYGAIAEKYFFHRDNPYFVAKTIKDRENELHIPYNIINDFSLNLPETITLWCQYIDISSEEQIKTRKSRWTDTGKLHRWKDGRVCIKGWSAFCRKNKIEDTDRCICEIVLGEEARVEMLQVHVVRKQF* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3291 708 CDD B3_DNA 32 123 IPR003340 GO:0003677
Aev04g3291 708 CDD B3_DNA 294 378 IPR003340 GO:0003677
Aev04g3291 708 MobiDBLite consensus disorder prediction 555 576 - -
Aev04g3291 708 PANTHER B3 DOMAIN-CONTAINING 33 385 - -
Aev04g3291 708 PANTHER B3 DOMAIN-CONTAINING 386 706 - -
Aev04g3291 708 MobiDBLite consensus disorder prediction 497 554 - -
Aev04g3291 708 CDD B3_DNA 391 485 IPR003340 GO:0003677
Aev04g3291 708 SUPERFAMILY DNA-binding pseudobarrel domain 31 124 IPR015300 -
Aev04g3291 708 Pfam B3 DNA binding domain 37 121 IPR003340 GO:0003677
Aev04g3291 708 Pfam B3 DNA binding domain 393 483 IPR003340 GO:0003677
Aev04g3291 708 Pfam B3 DNA binding domain 297 380 IPR003340 GO:0003677
Aev04g3291 708 ProSiteProfiles B3 DNA-binding domain profile. 32 125 IPR003340 GO:0003677
Aev04g3291 708 SUPERFAMILY DNA-binding pseudobarrel domain 591 703 IPR015300 -
Aev04g3291 708 MobiDBLite consensus disorder prediction 495 576 - -
Aev04g3291 708 Gene3D - 28 125 IPR015300 -
Aev04g3291 708 Gene3D - 386 491 IPR015300 -
Aev04g3291 708 MobiDBLite consensus disorder prediction 231 252 - -
Aev04g3291 708 ProSiteProfiles B3 DNA-binding domain profile. 295 388 IPR003340 GO:0003677
Aev04g3291 708 Gene3D - 581 707 IPR015300 -
Aev04g3291 708 Gene3D - 275 385 IPR015300 -
Aev04g3291 708 SUPERFAMILY DNA-binding pseudobarrel domain 289 379 IPR015300 -
Aev04g3291 708 MobiDBLite consensus disorder prediction 227 252 - -
Aev04g3291 708 ProSiteProfiles B3 DNA-binding domain profile. 391 488 IPR003340 GO:0003677
Aev04g3291 708 SUPERFAMILY DNA-binding pseudobarrel domain 387 486 IPR015300 -
Aev04g3291 708 SMART B3_2 32 125 IPR003340 GO:0003677
Aev04g3291 708 SMART B3_2 296 390 IPR003340 GO:0003677
Aev04g3291 708 SMART B3_2 393 488 IPR003340 GO:0003677
Aev04g3291 708 SMART B3_2 598 707 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3291 Aev-Chr4 31976597 31983074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3291 391 488 B3 DNA Binding Superfamily AT3G18990 30.303 5.13e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev04g3291 B3 1.8e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3291 - - vri:117911630 252.677