Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3288 ATGGATGGTAATCAGCAATGCAAGCCTTCCTTCTTCACAATCATAAGGGATGGCTACAACACTCAACACATGATGGTTCCACCTAAGTTTCTGAAGTATTTGGACAAAGAATTCTGTAGTAATGATACAACTACTATTATGTGTCCTAATGGTGAGAAGTGGCAAGTGACAATTTTGAAGAAAGGAGACAACATATTTATGAGTCATGGTTGGTCACAGTTTCTGAAAGATAACTCAGTCTTGCAGTGTGAGTTTTTGGTATTTACATATGATGGAAAGAACTGTTTCCAAGTCCAAATATTTGGGATAGATGGAACTGATTATTGGCCAATGCTGAGAACAAAGAATAGTACACATACAAAAAATTGTGCTTCAGGTTCTTCACACATCAATGAATCAAAGCCTTCTCAAGAAGAATTGGCTTCATTACTTCCTAAGGATAACCCTTCAGTGCCTAAGGCTGAAATTGAAAGAAGGTCAAATGATTGCAACTTGGTTGAGTCTTTTACCTCCAACAATCCTTTTTTCAAGCACCTCATGAAGAAAACTAATGTGAACATAGGGTGCTTTTTGAATATTGCTACCGAGTTTGCCAAGAAGCACCTTCTTCCAACAGTAAAAGAGATGAGACTCGAGAATTCCTCAGGAAAATGCTGGGAAGTGGCAGTGACTTGTCATTACACTAACAATAGAAGGTATCATCGGTTTTCAAAAGGATGGTCAAGATTTGTATATGACAACAAGCTCAAGATTGGTGACACTAGCATATTTGAACTTGAAGGTGGAAACAACATGAGAATTCACATATTCAGGTGTCCACAAAATTAG 828 0.3768 MDGNQQCKPSFFTIIRDGYNTQHMMVPPKFLKYLDKEFCSNDTTTIMCPNGEKWQVTILKKGDNIFMSHGWSQFLKDNSVLQCEFLVFTYDGKNCFQVQIFGIDGTDYWPMLRTKNSTHTKNCASGSSHINESKPSQEELASLLPKDNPSVPKAEIERRSNDCNLVESFTSNNPFFKHLMKKTNVNIGCFLNIATEFAKKHLLPTVKEMRLENSSGKCWEVAVTCHYTNNRRYHRFSKGWSRFVYDNKLKIGDTSIFELEGGNNMRIHIFRCPQN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3288 275 Pfam B3 DNA binding domain 175 271 IPR003340 GO:0003677
Aev04g3288 275 Pfam B3 DNA binding domain 14 101 IPR003340 GO:0003677
Aev04g3288 275 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 12 104 IPR044837 -
Aev04g3288 275 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 133 273 IPR044837 -
Aev04g3288 275 Gene3D - 156 273 IPR015300 -
Aev04g3288 275 CDD B3_DNA 9 101 IPR003340 GO:0003677
Aev04g3288 275 Gene3D - 3 104 IPR015300 -
Aev04g3288 275 SUPERFAMILY DNA-binding pseudobarrel domain 169 271 IPR015300 -
Aev04g3288 275 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500 133 273 - -
Aev04g3288 275 ProSiteProfiles B3 DNA-binding domain profile. 176 273 IPR003340 GO:0003677
Aev04g3288 275 CDD B3_DNA 174 271 IPR003340 GO:0003677
Aev04g3288 275 ProSiteProfiles B3 DNA-binding domain profile. 9 104 IPR003340 GO:0003677
Aev04g3288 275 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500 12 104 - -
Aev04g3288 275 SUPERFAMILY DNA-binding pseudobarrel domain 7 104 IPR015300 -
Aev04g3288 275 SMART B3_2 11 104 IPR003340 GO:0003677
Aev04g3288 275 SMART B3_2 176 273 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3288 9 269 B3 DNA Binding Superfamily AT5G18090 26.370 1.34e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev04g3288 B3 3.7e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3288 - - aprc:113865156 248.054