Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3281 ATGCTACATACCATTCGAGAAATACAACAAAAAGTGACAATGATGAAGAACAATATTGATAATGTCATCATTCAAGAACAACAGCACCACGTAGTAACGATAACATCAGCAGCAGCAACAACAACAACATGCGAGATATGCATTGAGCCTATGTCTGAAGAGAACTTCTTCAACTACAACAATGACAACAATTGTAACCATCCCTTTTGTTCGGATTGCATATCAAAATACATCAAAGTCCAAATAGAAGAGAATAATAAGGTAAATATACATTGTCCGGCATGGAAGTGCAAGCAAATGCTTGACCCCATGTTATGCAACTCCATCATCTCAAAACAACTCTTTGATAAATGGGGCGATAGACTTTGCACTTCGGCGCTCCCCGAGGTACAATACCGATGTTATTGTCCCTATGAGGATTGCAAAGAATTGATAATCAACGAGTGTGGAGGTGATGAGAGGAAGGTGGATTGCCCTAAGTGCAAGAAGCACGTGTGCTTCACGTGCCAGGTTCCATGGCATGAAGGGGCCAATTGCGAAGAGAATAAAAGTAATGATTTGTTTTCACAATTAGCTACAAGGAGAGGATGGAATAGGTGTCCTTCTTGTGGTTTCTGGGTTGAGCGTGTTTCAGGATGTTCCATCATTTATTGCAGGTAA 660 0.4076 MLHTIREIQQKVTMMKNNIDNVIIQEQQHHVVTITSAAATTTTCEICIEPMSEENFFNYNNDNNCNHPFCSDCISKYIKVQIEENNKVNIHCPAWKCKQMLDPMLCNSIISKQLFDKWGDRLCTSALPEVQYRCYCPYEDCKELIINECGGDERKVDCPKCKKHVCFTCQVPWHEGANCEENKSNDLFSQLATRRGWNRCPSCGFWVERVSGCSIIYCR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3281 219 Gene3D - 176 219 - -
Aev04g3281 219 ProSitePatterns Zinc finger RING-type signature. 65 74 IPR017907 -
Aev04g3281 219 Coils Coil 5 25 - -
Aev04g3281 219 ProSiteProfiles TRIAD supradomain profile. 40 219 IPR044066 -
Aev04g3281 219 SMART ibrneu5 116 179 IPR002867 -
Aev04g3281 219 Pfam IBR domain, a half RING-finger domain 130 179 IPR002867 -
Aev04g3281 219 SUPERFAMILY RING/U-box 41 128 - -
Aev04g3281 219 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 38 218 IPR031127 GO:0004842|GO:0016567
Aev04g3281 219 Pfam Zinc finger, C3HC4 type (RING finger) 44 93 IPR018957 GO:0046872
Aev04g3281 219 ProSiteProfiles Zinc finger RING-type profile. 44 96 IPR001841 -
Aev04g3281 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 130 IPR013083 -
Aev04g3281 219 SUPERFAMILY RING/U-box 118 183 - -
Aev04g3281 219 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 38 218 - -
Aev04g3281 219 SUPERFAMILY RING/U-box 185 218 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3281 43 219 C3H Transcription Factor Family AT2G19610 25.641 1.99e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3281 K11975 - twl:119998619 207.223