Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3273 ATGGATGACCCCTTTTCCCCTAAGGGAAAGGGAATTGGGTATTGGATGTCTCATCGGGATCAATTGGAGGGATCGACTTCATCAGATGGTGGAATGAATACGGTATCAGAGGACATGCTTAACAACCTCTCCGAGCTCATGAACTTCGATACATATGCTGGTTGGTGCAATAGTCCATCTGTTCCAACATTTGCCTCTGCACCATATTCGTCACCTGATGGATTCAATTTAGCAGAAAAGGGAAATGATCCATTCTTTATGACCGAAGATGGTGGAAATTACAATGCCATGCAGAGCTCTGCTGGTTATGGAGATAAAATTGTATTGCAGCAAATGGATAACCAACTTGTCTTGTCAGATGATGCAAATGATACAAATAACATAAATCCGAAACACAAAATTAGTGGCTCACTTCAACAACTTAATACCTCAGATGTGAGCAATTACCTGATCCCCAGGCCATCTTCTTGGTCACTTGATGAGAGGATGCTGAGAGCTTTGTCGTTCTTTAAGGAATCAGCCGGTGGGGGAATATTGGCGCAAGTTTGGGTACCCCAGAGACATGGTAATGAATTCATCTTGAGCACAAGTGAGCAGCCGTATTTGCTGGATCAAATGCTTGCTGGGTATCGTGAAGTGTCGCGGGCATTTACGTTTTCTGCCGAGGGAAAACCGGGCTCTTTTCCCGGGCTTCCTGGTCGTGTGTTTATCTCCCATGTTCCTGAATGGACCTCCAATGTTGGTTACTACAATAAAACAGAGTACTTGAGGGTGGAGCATGCAATCAATCACGCAGTTCAAGGATCAATTGCTCTTCCCATAATCGATCAGCACTCTGAAGTACCTTGTTGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAACCCGATTTTGACAGAGAATTAGAAATTGTTAGCAATGCGCTCCAGCTTGTTAATTTAAGGACTACTACGCCTCCACGACTTCTTTCCCAGTCTCTATCAAATAACAAAAGAGCTGCTTTAACGGAGATAATTGATGTGTTACGAGCTGTGTGTCATGCACATAAATTGCCACTGGCATTGACATGGATCCCCTGTTATTATAGTGAGGCAACCAAAGATGGAACTGCGAAGATACGGGTTAAAGAGGGGCATACAAGTTGCAATGAAAAATCTGTACTATGCATCCAAGAATCAGCTTGCTATATAAATGATAGAACGGTAGGGGGATTTGTTCATGCATGCGTTGAACATCATCTTGAGGAAGGGCAAGGCATAGTTGGGAAAGCACTTCAATCAAATCATCCGTTCTTCTATCCTGATGTGAAGGCATATAATATTAGTGAATATCCCCTCGTTCAACATGCACGTAAGTACAATTTGAATGCCGCCGTTGCAATTAGGCTAAGGAGTACTTATACTAATGACGATGATTACATATTAGAATTCTTTCTGCCTGTCAATATGAGAGGGAGCCAAGAACAGCAACTTTTATTAGACAATCTCTCAGGTACTATGCAGAGAATTTGTAAGAGTTTGAGGACAGTTTCAGATGCTGAATTGTCAGGATTAGAAGGCTCACATGTTGGGCTTCCTAAGGAAAAAGTCTCAAGTTTTTTCTCTATGTCTAGGAGAAACTCTCATATATCATTAAATGATGATCATGAGACAGAGTCCTTAAAGGCATCTAGCCTGAGAACTAGTGAAATCGAAACCGCTCACAATCAGGCAATGAGTGGACCAAGAAGGCATGTTGAGAAAAGGAGAAGCACAGTGGAGAAGAATGTAAGCTTGAGTGTTCTCCAACAATACTTTTCTGGTAGTCTGAAGGATGCAGCAAAAAGCATTGGTGTTTGCCCAACAACTCTAAAAAGGATATGCAGGCAACATGGAATTTCAAGATGGCCATCTCGCAAGATTAATAAAGTGAATCGTTCGTTGAAGAAAATACAGACTGTGCTTGACTCGGTCCAAGGAGTGGAAGGAGGGTTGAAGTTTGATCCTTACACCGGGGGTTTTGTTGCAGGAGGTTCAATCACTCATGAAATCGATGCACAAAAAAGTCTTCTCTTCCCCGATAAACGTTCTGTAGATGACCATGAGCCTGTATTACAAGCTGCAGTCACAGTACCTCCAGCGCCCGGTGGAAAAGGTGAGAATTTAGCGGTTAAGTTGGAGGAGGATGATATTAATTTGGTGGGGAACCAGTTCTTGCATTCACGTTTGCTTCTCTCTAATTCCGAGGGAGAGTTGAAGAAAGGCAAAGCTTCTTCTGTTGATTGTAGTGAAGATTCAAAATCAATAGCCATATGGGGTGTGAGCCAGAGTAGCTTGGGAGTAGAAAATCCTAGCCGTGACATCGCCCGACACAGTCCAAGCTCGCTGTTTGCTGATGAGATGGAAATTGGCATCGATGGAGCAGACGCAGCTGTTGACCATAATCACAACACTTCTTCAAGCATGACAGACTCATCCAATGGCTCCGGTTCAGTTATGCACCGCAGCTCATCTGGCTCTCAGAGCTTTGAGAACCTGAAAATTTCCAAAGCAAAATCAACTTGTGCGGATAGTGGGTCAAAACTTATTGTCAAAGCTTCCTACAAAGAAGATACTATTCGTTTCAAGTTTGATCCATCGGCTGGTTGTTTCCAGCTGTATGAAGAAGTTGCATCGAGGTTCAAACTGCAAAGCGGGTCGTTCCAGCTCAAATATCTTGATGATGAAGACGAATGGGTGATGATGGTAAATGACTCAGATTTGCAGGAATGTATAGAAATCTTGGATGAACTTGGCACGCGGAGCGTGAAGTTCCTTGTCCGCGACGTGCCTACCGGTTTAAGCAGCCGTGGCAGTAACAACTGCTTCTTGGCAGACAGCTCATAG 2865 0.4339 MDDPFSPKGKGIGYWMSHRDQLEGSTSSDGGMNTVSEDMLNNLSELMNFDTYAGWCNSPSVPTFASAPYSSPDGFNLAEKGNDPFFMTEDGGNYNAMQSSAGYGDKIVLQQMDNQLVLSDDANDTNNINPKHKISGSLQQLNTSDVSNYLIPRPSSWSLDERMLRALSFFKESAGGGILAQVWVPQRHGNEFILSTSEQPYLLDQMLAGYREVSRAFTFSAEGKPGSFPGLPGRVFISHVPEWTSNVGYYNKTEYLRVEHAINHAVQGSIALPIIDQHSEVPCCAVLELVTTKEKPDFDRELEIVSNALQLVNLRTTTPPRLLSQSLSNNKRAALTEIIDVLRAVCHAHKLPLALTWIPCYYSEATKDGTAKIRVKEGHTSCNEKSVLCIQESACYINDRTVGGFVHACVEHHLEEGQGIVGKALQSNHPFFYPDVKAYNISEYPLVQHARKYNLNAAVAIRLRSTYTNDDDYILEFFLPVNMRGSQEQQLLLDNLSGTMQRICKSLRTVSDAELSGLEGSHVGLPKEKVSSFFSMSRRNSHISLNDDHETESLKASSLRTSEIETAHNQAMSGPRRHVEKRRSTVEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPYTGGFVAGGSITHEIDAQKSLLFPDKRSVDDHEPVLQAAVTVPPAPGGKGENLAVKLEEDDINLVGNQFLHSRLLLSNSEGELKKGKASSVDCSEDSKSIAIWGVSQSSLGVENPSRDIARHSPSSLFADEMEIGIDGADAAVDHNHNTSSSMTDSSNGSGSVMHRSSSGSQSFENLKISKAKSTCADSGSKLIVKASYKEDTIRFKFDPSAGCFQLYEEVASRFKLQSGSFQLKYLDDEDEWVMMVNDSDLQECIEILDELGTRSVKFLVRDVPTGLSSRGSNNCFLADSS* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3273 954 Gene3D - 851 934 - -
Aev04g3273 954 ProSiteProfiles RWP-RK domain profile. 569 657 IPR003035 -
Aev04g3273 954 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 950 - -
Aev04g3273 954 PANTHER PROTEIN NLP8 5 950 IPR045012 GO:0003700
Aev04g3273 954 SUPERFAMILY CAD & PB1 domains 848 937 - -
Aev04g3273 954 Pfam PB1 domain 857 935 IPR000270 GO:0005515
Aev04g3273 954 SMART PB1_new 854 936 IPR000270 GO:0005515
Aev04g3273 954 Pfam RWP-RK domain 589 637 IPR003035 -
Aev04g3273 954 ProSiteProfiles PB1 domain profile. 854 936 IPR000270 GO:0005515
Aev04g3273 954 CDD PB1_NLP 855 935 IPR034891 -
Aev04g3273 954 MobiDBLite consensus disorder prediction 807 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3273 Aev-Chr4 31894532 31898436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3273 1 951 NLP Transcription Factor Family AT2G43500 50.304 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev04g3273 PB1 1.5e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3273 - - aprc:113864503 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1712 10 19310647 19313842 Aev04g3273 04 31894532 31898436 PCT