Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev04g3263 | ATGCCGCTTCCGGCGAAATCAACGAGACCGCTATCGGGAGGCGGCGCCGGCGCTAGAGATTCCGACGAGTTAGGTTCTCCGTCGAACAACCTTTGGGTTGGGAACCTGGCGCCGGACGTAACCGACGCCGATCTGATGGACCTGTTCGCTCAGTACGGCGCGCTTGACAGCGTGAATTCGTACTCGTCGCGTAGCTACGCTTTCGTGTACTTCAAGCGCGTGGAGGATGCCAAGGCCGCGAAGAACGCACTCCAAGGGTTCTCTCTCCGCGGCAATTCGCTGAAAATCGAATTTGCCAGACCGGCAAGGCCTTGTAAACAGCTTTGGGTGGGTGGTATTAGCCCAGCTGTTACAAAGGAAGAATTGGAAGCTGAATTTCGTAAATTTGGTAAAATTGAGGATTTTAAGTTCTTCAGGGACAGAAATACTGCATGTGTTGAATTTTTCAATTTGGACGATGCTACTCAGGCAATGAAAGTCATGAATGGGATACGCTTAGGTGGCGATCATATTCGTGTAGACTTCCTTCGATCACATTCTATGAAAAGGGATCAGTTGCCTGATTATGGGCACTTTCAAGGAAGGAACTTCGGGCCTACTGATTCCTACACTGGACAGAAAAGACCGCTGCATTCACAACCTTCAATGGGGAGGAAAGGTGATGGTCAACCTAGTAATATTTTGTGGATAGGCTATCCTCCGGCTGTGCAGATTGACGAGCAAATGCTCCACAATGCCATGATTTTATTTGGTGAAATTGAGAGAATCAAGAGCTTTCCTTCAAGGAACTATTCATTTGTTGAATTTAGAAGTGTTGATGAAGCTCGGCGTGCAAAAGAGGGCCTTCAAGGACGCCTTTTTAATGATCCTCGAATAACGATTATGTATTCAAGCAGTGAGGTGGTATATGGAAAAGATTATCCTGGAAATAATGGGCCAAGAGGTGATATTTTCCTGAATGAGCATCCGTTTCGACCATTACAAATGGATGCTTATGGTCATAGTCGCCCAATGGTTCCAAATAACTTCCCTGGACAGTTACCACCTGGTGGTATTATTGGATCAAATGCATCAATGAGGCCTTTTGGTCCTCAAGGTAGTCTTGATCCTCTGATTTCTGGCCCCGAGTTTAATGAGATGGGCGCTCTCCAGAAATTTCAGGATGGTAGCTCCAAGGGCAACATGGGTCCAAACTGGAAAAGGCCATCTCCTCCTGCACCAGGGAAGCTTCCTCCTTCTCCAGCATCAGGGATTAGGCTTCCTCCAAGATCAGCCTCTGGTGCATGGGATGTACTAGACATAAACCATGTTCCAAGAGATTCTAAACGTATGAGGATAGATGGAACTTTACCTGTTGACGATGCTCCATATCCTTTAAGGAATATAGATGATCGTGGATTAGGTGTAGAGCAAACATATGGAGTACATGGTTCTGCACAACCTGAAGCTGATCATATATGGCGTGGAATCATTGCAAAAGGAGGAACTCCTGTTTGTCATGCTAGATGTGTCCCTATTGGGAAAGGGTTAGCGACTGAGCTTCCTGATGTTGTTGATTGCTCAGCTAGAACGGGATTGGATATACTCACAAAGCACTATGCTGATGCAATTGGTTTTGACATTGTTTTCTTTCTGCCTGATAGCGAAGATGATTTTGCTTCATATACTGAATTCCTTCGCTATCTTAGTGCAAAAAATCGTGCTGGTGTTGCCAAATTTGCTGATAACACCACCTTGTTCTTGGTACCTCCTTCTGATTTCCTGACAAAAGTTTTGAAGGTCACGGGACCAGAACGTCTATATGGTGTGGTTCTTAAGTTTCCACCGGCACCAAGTAGCGCACCAGGGCAACAATCATCGCATTTGCCTATACCGTCATCTCAGTATATGCAGCAGATTCCTCATTCACAAGCTGAGTATGGTTTGATTCCTTCAAAGGATGAACCGGTCTTGCCAATGGATTACAACAGATTGTTGCACGAGGAGTCTAAGTTTCCTCCTAAACCAGGTTATCCAACTTCAAGTGGTCCCCCTTCAGTTCAAGCTGGGCCTCCAGATTATGCTCCTAGTACTACTGCTTCCATGTCTCAAGCTGGGGTTGCATTGACACCTGAGCTTATTGCAGCTTTAACTACTTTAATTCCTGCAACTACACAATCAGCTACAACTGATGGTGCCAAGTCAGCAGTAGGCTCCTCAGCTGTGAAGCCTCCATTTCCTCCTGTTGCACCCAATGATGGTAACCAATCTCATTTATGGAAACAGGACCACCAAATTGCTGATCAGTCCATTCACCCTCCTCAACAGTTGGGGAGTATGTATAACATTCAGAATGCTCACTATCAGCCTTATCCACCACCATCTGTGCCTGGCCATCCTTCTCAGGTGGTGTCTGGCAGTTCTCATATGGACACTGCTGTTGGCCTGCAGCAGCAGGGTGCTGTTCCACCTAGACAGATGAATAATTTCATGATGCCTTCTCAAAGTGGGCAGGTAGCTGCACCCCACCATGTCAGTCAGCAGTATCAGGTTGAAGTCTCCCCCAACACTCAGAAAGGCTATGGTCTGGTGCCAGGAACAGATGCCTCTGTTTTATACAATTCTCAGGCTTACCAGCAACCAAATAATTCTATGGTTTCGTCTAATCAAATTCAAAGCGCTAATCCTTCACAGCAACAAAGTGCCATGCCTTATACAGTGGACCAAGTAAACGCAGATCCTTCCAGTCAGCAACTTCCTCTCTTTGGAGTTGGTCAGGGCACATCAGAAGTTGAGGCTGATAAGAACCAGAGATACCAGTCAACGTTACAGTTTGCTGCCAATCTTCTCCTCCAAATACAGCAGCAGCAACAGCAAGCACCAGGAGGACATGGGCCGGGATTTCAACAATGA | 2892 | 0.464 | MPLPAKSTRPLSGGGAGARDSDELGSPSNNLWVGNLAPDVTDADLMDLFAQYGALDSVNSYSSRSYAFVYFKRVEDAKAAKNALQGFSLRGNSLKIEFARPARPCKQLWVGGISPAVTKEELEAEFRKFGKIEDFKFFRDRNTACVEFFNLDDATQAMKVMNGIRLGGDHIRVDFLRSHSMKRDQLPDYGHFQGRNFGPTDSYTGQKRPLHSQPSMGRKGDGQPSNILWIGYPPAVQIDEQMLHNAMILFGEIERIKSFPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMYSSSEVVYGKDYPGNNGPRGDIFLNEHPFRPLQMDAYGHSRPMVPNNFPGQLPPGGIIGSNASMRPFGPQGSLDPLISGPEFNEMGALQKFQDGSSKGNMGPNWKRPSPPAPGKLPPSPASGIRLPPRSASGAWDVLDINHVPRDSKRMRIDGTLPVDDAPYPLRNIDDRGLGVEQTYGVHGSAQPEADHIWRGIIAKGGTPVCHARCVPIGKGLATELPDVVDCSARTGLDILTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLSAKNRAGVAKFADNTTLFLVPPSDFLTKVLKVTGPERLYGVVLKFPPAPSSAPGQQSSHLPIPSSQYMQQIPHSQAEYGLIPSKDEPVLPMDYNRLLHEESKFPPKPGYPTSSGPPSVQAGPPDYAPSTTASMSQAGVALTPELIAALTTLIPATTQSATTDGAKSAVGSSAVKPPFPPVAPNDGNQSHLWKQDHQIADQSIHPPQQLGSMYNIQNAHYQPYPPPSVPGHPSQVVSGSSHMDTAVGLQQQGAVPPRQMNNFMMPSQSGQVAAPHHVSQQYQVEVSPNTQKGYGLVPGTDASVLYNSQAYQQPNNSMVSSNQIQSANPSQQQSAMPYTVDQVNADPSSQQLPLFGVGQGTSEVEADKNQRYQSTLQFAANLLLQIQQQQQQAPGGHGPGFQQ* | 964 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev04g3263 | 963 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 4 | 962 | - | - | |
Aev04g3263 | 963 | SUPERFAMILY | RNA-binding domain, RBD | 103 | 201 | IPR035979 | GO:0003676 | |
Aev04g3263 | 963 | PANTHER | FLOWERING TIME CONTROL PROTEIN FPA | 4 | 962 | - | - | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 400 | 418 | - | - | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 778 | 801 | - | - | |
Aev04g3263 | 963 | CDD | RRM3_Spen | 108 | 177 | - | - | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 343 | 367 | - | - | |
Aev04g3263 | 963 | CDD | RRM3_Spen | 228 | 297 | - | - | |
Aev04g3263 | 963 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 226 | 299 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 670 | 684 | - | - | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 661 | 692 | - | - | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Aev04g3263 | 963 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 108 | 171 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 238 | 292 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 31 | 95 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | SMART | rrm1_1 | 227 | 295 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | SMART | rrm1_1 | 30 | 97 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | SMART | rrm1_1 | 107 | 174 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 197 | 221 | - | - | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 197 | 211 | - | - | |
Aev04g3263 | 963 | CDD | RRM3_Spen | 31 | 100 | - | - | |
Aev04g3263 | 963 | Pfam | SPOC domain | 481 | 598 | IPR012921 | - | |
Aev04g3263 | 963 | Gene3D | - | 17 | 102 | IPR012677 | - | |
Aev04g3263 | 963 | Gene3D | - | 215 | 304 | IPR012677 | - | |
Aev04g3263 | 963 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 29 | 101 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 106 | 178 | IPR000504 | GO:0003723 | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 386 | 422 | - | - | |
Aev04g3263 | 963 | SUPERFAMILY | RNA-binding domain, RBD | 221 | 315 | IPR035979 | GO:0003676 | |
Aev04g3263 | 963 | MobiDBLite | consensus disorder prediction | 723 | 750 | - | - | |
Aev04g3263 | 963 | Gene3D | - | 103 | 212 | IPR012677 | - | |
Aev04g3263 | 963 | SUPERFAMILY | RNA-binding domain, RBD | 18 | 103 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev04g3263 | Aev-Chr4 | 31832498 | 31837611 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev04g3263 | 27 | 289 | Eukaryotic Initiation Factors Gene Family | AT1G22760 | 23.239 | 2.74e-07 | 52.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev04g3263 | - | - | gmx:100777570 | 1461.43 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev10g1722 | 10 | 19371015 | 19375321 | Aev04g3263 | 04 | 31832498 | 31837611 | PCT |