Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3263 ATGCCGCTTCCGGCGAAATCAACGAGACCGCTATCGGGAGGCGGCGCCGGCGCTAGAGATTCCGACGAGTTAGGTTCTCCGTCGAACAACCTTTGGGTTGGGAACCTGGCGCCGGACGTAACCGACGCCGATCTGATGGACCTGTTCGCTCAGTACGGCGCGCTTGACAGCGTGAATTCGTACTCGTCGCGTAGCTACGCTTTCGTGTACTTCAAGCGCGTGGAGGATGCCAAGGCCGCGAAGAACGCACTCCAAGGGTTCTCTCTCCGCGGCAATTCGCTGAAAATCGAATTTGCCAGACCGGCAAGGCCTTGTAAACAGCTTTGGGTGGGTGGTATTAGCCCAGCTGTTACAAAGGAAGAATTGGAAGCTGAATTTCGTAAATTTGGTAAAATTGAGGATTTTAAGTTCTTCAGGGACAGAAATACTGCATGTGTTGAATTTTTCAATTTGGACGATGCTACTCAGGCAATGAAAGTCATGAATGGGATACGCTTAGGTGGCGATCATATTCGTGTAGACTTCCTTCGATCACATTCTATGAAAAGGGATCAGTTGCCTGATTATGGGCACTTTCAAGGAAGGAACTTCGGGCCTACTGATTCCTACACTGGACAGAAAAGACCGCTGCATTCACAACCTTCAATGGGGAGGAAAGGTGATGGTCAACCTAGTAATATTTTGTGGATAGGCTATCCTCCGGCTGTGCAGATTGACGAGCAAATGCTCCACAATGCCATGATTTTATTTGGTGAAATTGAGAGAATCAAGAGCTTTCCTTCAAGGAACTATTCATTTGTTGAATTTAGAAGTGTTGATGAAGCTCGGCGTGCAAAAGAGGGCCTTCAAGGACGCCTTTTTAATGATCCTCGAATAACGATTATGTATTCAAGCAGTGAGGTGGTATATGGAAAAGATTATCCTGGAAATAATGGGCCAAGAGGTGATATTTTCCTGAATGAGCATCCGTTTCGACCATTACAAATGGATGCTTATGGTCATAGTCGCCCAATGGTTCCAAATAACTTCCCTGGACAGTTACCACCTGGTGGTATTATTGGATCAAATGCATCAATGAGGCCTTTTGGTCCTCAAGGTAGTCTTGATCCTCTGATTTCTGGCCCCGAGTTTAATGAGATGGGCGCTCTCCAGAAATTTCAGGATGGTAGCTCCAAGGGCAACATGGGTCCAAACTGGAAAAGGCCATCTCCTCCTGCACCAGGGAAGCTTCCTCCTTCTCCAGCATCAGGGATTAGGCTTCCTCCAAGATCAGCCTCTGGTGCATGGGATGTACTAGACATAAACCATGTTCCAAGAGATTCTAAACGTATGAGGATAGATGGAACTTTACCTGTTGACGATGCTCCATATCCTTTAAGGAATATAGATGATCGTGGATTAGGTGTAGAGCAAACATATGGAGTACATGGTTCTGCACAACCTGAAGCTGATCATATATGGCGTGGAATCATTGCAAAAGGAGGAACTCCTGTTTGTCATGCTAGATGTGTCCCTATTGGGAAAGGGTTAGCGACTGAGCTTCCTGATGTTGTTGATTGCTCAGCTAGAACGGGATTGGATATACTCACAAAGCACTATGCTGATGCAATTGGTTTTGACATTGTTTTCTTTCTGCCTGATAGCGAAGATGATTTTGCTTCATATACTGAATTCCTTCGCTATCTTAGTGCAAAAAATCGTGCTGGTGTTGCCAAATTTGCTGATAACACCACCTTGTTCTTGGTACCTCCTTCTGATTTCCTGACAAAAGTTTTGAAGGTCACGGGACCAGAACGTCTATATGGTGTGGTTCTTAAGTTTCCACCGGCACCAAGTAGCGCACCAGGGCAACAATCATCGCATTTGCCTATACCGTCATCTCAGTATATGCAGCAGATTCCTCATTCACAAGCTGAGTATGGTTTGATTCCTTCAAAGGATGAACCGGTCTTGCCAATGGATTACAACAGATTGTTGCACGAGGAGTCTAAGTTTCCTCCTAAACCAGGTTATCCAACTTCAAGTGGTCCCCCTTCAGTTCAAGCTGGGCCTCCAGATTATGCTCCTAGTACTACTGCTTCCATGTCTCAAGCTGGGGTTGCATTGACACCTGAGCTTATTGCAGCTTTAACTACTTTAATTCCTGCAACTACACAATCAGCTACAACTGATGGTGCCAAGTCAGCAGTAGGCTCCTCAGCTGTGAAGCCTCCATTTCCTCCTGTTGCACCCAATGATGGTAACCAATCTCATTTATGGAAACAGGACCACCAAATTGCTGATCAGTCCATTCACCCTCCTCAACAGTTGGGGAGTATGTATAACATTCAGAATGCTCACTATCAGCCTTATCCACCACCATCTGTGCCTGGCCATCCTTCTCAGGTGGTGTCTGGCAGTTCTCATATGGACACTGCTGTTGGCCTGCAGCAGCAGGGTGCTGTTCCACCTAGACAGATGAATAATTTCATGATGCCTTCTCAAAGTGGGCAGGTAGCTGCACCCCACCATGTCAGTCAGCAGTATCAGGTTGAAGTCTCCCCCAACACTCAGAAAGGCTATGGTCTGGTGCCAGGAACAGATGCCTCTGTTTTATACAATTCTCAGGCTTACCAGCAACCAAATAATTCTATGGTTTCGTCTAATCAAATTCAAAGCGCTAATCCTTCACAGCAACAAAGTGCCATGCCTTATACAGTGGACCAAGTAAACGCAGATCCTTCCAGTCAGCAACTTCCTCTCTTTGGAGTTGGTCAGGGCACATCAGAAGTTGAGGCTGATAAGAACCAGAGATACCAGTCAACGTTACAGTTTGCTGCCAATCTTCTCCTCCAAATACAGCAGCAGCAACAGCAAGCACCAGGAGGACATGGGCCGGGATTTCAACAATGA 2892 0.464 MPLPAKSTRPLSGGGAGARDSDELGSPSNNLWVGNLAPDVTDADLMDLFAQYGALDSVNSYSSRSYAFVYFKRVEDAKAAKNALQGFSLRGNSLKIEFARPARPCKQLWVGGISPAVTKEELEAEFRKFGKIEDFKFFRDRNTACVEFFNLDDATQAMKVMNGIRLGGDHIRVDFLRSHSMKRDQLPDYGHFQGRNFGPTDSYTGQKRPLHSQPSMGRKGDGQPSNILWIGYPPAVQIDEQMLHNAMILFGEIERIKSFPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMYSSSEVVYGKDYPGNNGPRGDIFLNEHPFRPLQMDAYGHSRPMVPNNFPGQLPPGGIIGSNASMRPFGPQGSLDPLISGPEFNEMGALQKFQDGSSKGNMGPNWKRPSPPAPGKLPPSPASGIRLPPRSASGAWDVLDINHVPRDSKRMRIDGTLPVDDAPYPLRNIDDRGLGVEQTYGVHGSAQPEADHIWRGIIAKGGTPVCHARCVPIGKGLATELPDVVDCSARTGLDILTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLSAKNRAGVAKFADNTTLFLVPPSDFLTKVLKVTGPERLYGVVLKFPPAPSSAPGQQSSHLPIPSSQYMQQIPHSQAEYGLIPSKDEPVLPMDYNRLLHEESKFPPKPGYPTSSGPPSVQAGPPDYAPSTTASMSQAGVALTPELIAALTTLIPATTQSATTDGAKSAVGSSAVKPPFPPVAPNDGNQSHLWKQDHQIADQSIHPPQQLGSMYNIQNAHYQPYPPPSVPGHPSQVVSGSSHMDTAVGLQQQGAVPPRQMNNFMMPSQSGQVAAPHHVSQQYQVEVSPNTQKGYGLVPGTDASVLYNSQAYQQPNNSMVSSNQIQSANPSQQQSAMPYTVDQVNADPSSQQLPLFGVGQGTSEVEADKNQRYQSTLQFAANLLLQIQQQQQQAPGGHGPGFQQ* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3263 963 PANTHER RNA RECOGNITION MOTIF-CONTAINING 4 962 - -
Aev04g3263 963 SUPERFAMILY RNA-binding domain, RBD 103 201 IPR035979 GO:0003676
Aev04g3263 963 PANTHER FLOWERING TIME CONTROL PROTEIN FPA 4 962 - -
Aev04g3263 963 MobiDBLite consensus disorder prediction 400 418 - -
Aev04g3263 963 MobiDBLite consensus disorder prediction 778 801 - -
Aev04g3263 963 CDD RRM3_Spen 108 177 - -
Aev04g3263 963 MobiDBLite consensus disorder prediction 343 367 - -
Aev04g3263 963 CDD RRM3_Spen 228 297 - -
Aev04g3263 963 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 226 299 IPR000504 GO:0003723
Aev04g3263 963 MobiDBLite consensus disorder prediction 670 684 - -
Aev04g3263 963 MobiDBLite consensus disorder prediction 661 692 - -
Aev04g3263 963 MobiDBLite consensus disorder prediction 1 26 - -
Aev04g3263 963 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 108 171 IPR000504 GO:0003723
Aev04g3263 963 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 238 292 IPR000504 GO:0003723
Aev04g3263 963 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 95 IPR000504 GO:0003723
Aev04g3263 963 SMART rrm1_1 227 295 IPR000504 GO:0003723
Aev04g3263 963 SMART rrm1_1 30 97 IPR000504 GO:0003723
Aev04g3263 963 SMART rrm1_1 107 174 IPR000504 GO:0003723
Aev04g3263 963 MobiDBLite consensus disorder prediction 197 221 - -
Aev04g3263 963 MobiDBLite consensus disorder prediction 197 211 - -
Aev04g3263 963 CDD RRM3_Spen 31 100 - -
Aev04g3263 963 Pfam SPOC domain 481 598 IPR012921 -
Aev04g3263 963 Gene3D - 17 102 IPR012677 -
Aev04g3263 963 Gene3D - 215 304 IPR012677 -
Aev04g3263 963 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 101 IPR000504 GO:0003723
Aev04g3263 963 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 106 178 IPR000504 GO:0003723
Aev04g3263 963 MobiDBLite consensus disorder prediction 386 422 - -
Aev04g3263 963 SUPERFAMILY RNA-binding domain, RBD 221 315 IPR035979 GO:0003676
Aev04g3263 963 MobiDBLite consensus disorder prediction 723 750 - -
Aev04g3263 963 Gene3D - 103 212 IPR012677 -
Aev04g3263 963 SUPERFAMILY RNA-binding domain, RBD 18 103 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3263 Aev-Chr4 31832498 31837611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3263 27 289 Eukaryotic Initiation Factors Gene Family AT1G22760 23.239 2.74e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3263 - - gmx:100777570 1461.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1722 10 19371015 19375321 Aev04g3263 04 31832498 31837611 PCT