Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3257 ATGAAGATTCAGTGTGATGTGTGTGAGAAATCTCAAGCAACAGTGATATGTTGTGCAGATGAAGCAGCTTTGTGTGCAAAATGTGATGTTGAGGTTCATGCTGCAAACAAGCTTGCAAGCAAGCACCAAAGGCTTCTCCTTCAATCTCTCTCTAACAAGCTTCCAACTTGTGATATTTGCCAAGATAAGGCAGCTTTCATATTTTGTGTTGAGGACAGAGCTCTGTTCTGTAAGGATTGCGATGAGCCGATCCATTCGGCCGGAAGCCTCTCGGCGAACCACCAGCGCTTCCTTGCTACCGGTATCCGAGTGGCTTTAGGGTCTAATAACTGCTCCAAAGGCAATGAAAAAAGCCGTTTGGAACCATCTAATCAGAGTGCTCAACAAGTTGTTCCTGCAAGTTTTCCTTCTCAGCAAGTGCCGAGCGTCGCCTCCTCTTGGGCTGTCGATGAACTGTTGGAATTAACAGACTTCGGATCGCCGGAAAAAAAGCAGACTGAAGAATTCGGAGAGCTCGAATGGCTAGCCGACGTAGGTCTTTTCGGCGAAACTCTGGCGGCAGCCGAAGTTCCTCAGCTTCCGGTGACACACACTAGCAACAATGTTGGCTCATACAAAGGCATTAGATCATACTCCTCCTCCTTCTCCTCCTCCTCCTATATGTCCAACAAAAAGCCTAGGATGGAAGTACTAGTTGAAGATGATGAACACTTCACTGTGCCTGATCTTGGCTAA 735 0.4721 MKIQCDVCEKSQATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQSLSNKLPTCDICQDKAAFIFCVEDRALFCKDCDEPIHSAGSLSANHQRFLATGIRVALGSNNCSKGNEKSRLEPSNQSAQQVVPASFPSQQVPSVASSWAVDELLELTDFGSPEKKQTEEFGELEWLADVGLFGETLAAAEVPQLPVTHTSNNVGSYKGIRSYSSSFSSSSYMSNKKPRMEVLVEDDEHFTVPDLG* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3257 244 CDD Bbox1_BBX-like 57 98 - -
Aev04g3257 244 Gene3D Classic Zinc Finger 1 92 - -
Aev04g3257 244 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aev04g3257 244 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 244 - -
Aev04g3257 244 SMART bboxneu5 52 99 IPR000315 GO:0008270
Aev04g3257 244 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aev04g3257 244 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Aev04g3257 244 CDD Bbox1_BBX-like 5 47 - -
Aev04g3257 244 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 244 - -
Aev04g3257 244 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3257 Aev-Chr4 31796547 31798928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3257 1 163 Orphan Transcription Factor Family AT1G06040 66.864 4.56e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev04g3257 zf-B_box 1.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3257 - - gmx:100797515 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1728 10 19414002 19415513 Aev04g3257 04 31796547 31798928 PCT