Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3253 ATGGCTATGGTTTGTGGAATGTTTTTCCTTGGCAATGAAAAACTTATAGCAGATTTTGTTATTTGTGCAGTGGAGTCTGGGACTGATGGCTCTGTTAATGGGGAGACTGTAGAAAGTGCTTCAATGATTGATGATTGTACCATTGTTGTGGTAAACAACACAGGTGGGAGTTCTGTTGAGCCGGCTCCCGAACAAGATCAAGACGATAAGGAAACTCAAGGCTTAGCTGAAGGGGTCATGATCCCAGCTGCTGTTCCTGTAGTCTCAGTCGTTTCACCTGGTGAGCCCTATGTGGGTCAGGAGTTTGATTCGGAAGGAGAAGCTCACGCGTTCTATAACGCATACGCCACAAGCGTTGGATTCATCTTGCGTGTTAGTAAACTGTCGCGATCGAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTTTGCAACAAAGAGGGTTTCAGGATGCCTGACAAGCGCGAAAACATCGTTAGGCAAAGGGCAGAGACGAGGGTTGGTTGCAAGGCAATGATCATGGTGAGGAAAATAAAGTCGGGTAAATGGGTCGTTACAAAGTTTGTAAAAGAGCACACGCATCCTCTTGCTGCTCCTGGAACGGTTAGAAGGGATTGCATTTATGAACTTCCGAGCGATAATGAGAAAATTCGGGAACTAACTCAGCAGTTGGCATCGGAGAAAAAGCGATCTGCCACTTACAAAAGACATCTCGAATTGATACTCGAGCACATTGACGAGTTCAACGAGAGCCTTTCAAAGAAAATACAGCACATAGTAGACAATGTAAAGGAAATGGAAACCAAAGAACAACATGACCAGTTGAACTTTCAGCTATCCACTCTCTAA 849 0.4464 MAMVCGMFFLGNEKLIADFVICAVESGTDGSVNGETVESASMIDDCTIVVVNNTGGSSVEPAPEQDQDDKETQGLAEGVMIPAAVPVVSVVSPGEPYVGQEFDSEGEAHAFYNAYATSVGFILRVSKLSRSRIDNSAIGRIFVCNKEGFRMPDKRENIVRQRAETRVGCKAMIMVRKIKSGKWVVTKFVKEHTHPLAAPGTVRRDCIYELPSDNEKIRELTQQLASEKKRSATYKRHLELILEHIDEFNESLSKKIQHIVDNVKEMETKEQHDQLNFQLSTL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3253 282 Coils Coil 249 269 - -
Aev04g3253 282 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 23 273 - -
Aev04g3253 282 Coils Coil 217 237 - -
Aev04g3253 282 Pfam FAR1 DNA-binding domain 111 197 IPR004330 -
Aev04g3253 282 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3253 Aev-Chr4 31780192 31781770 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev04g3253 FAR1 4.4e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3253 - - adu:107476765 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1732 10 19428991 19430751 Aev04g3253 04 31780192 31781770 PCT