Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3226 ATGTCGACTCCGACCACCGCTCCAGGCGGCGACTCTGTTTCCGACGAAATCGAAACGCCGACGCTGGACAGGGAGTCCCGGGCGCTACTCCAGGAGATCTCGGAGCACGGAGGCTACGCCTACGTGAGCATGGCGGCGATAGGAGACTTCCGCGCAGCGGAGGCGGCGCGTGAGATGGCGTGGGAGCAGCTGCACTCTGGTCCGTGGCATTCGGTGCTTCCGGTGTGGCGCGACGCGTATTCCATGGCGTGCCTCCACGTGGCGAAGCACCACCATGAAAACGGTGAGTTCAAGGAGGCGCTTAGGGTTCTTGATATGGGGATCATCATGGGAGGGACGCTGCTGAGGAAGGATTTGGACTCTGCTATCGAGAAGGTCTCGGAGAGAGCGAGGAGGAGCACCACTAGGGTTTCTCAGGGGAGCTGCGAAGGTTCCGGGAACTCCTCCGAGCGAAAGACACTCGTCGATCGGGAATTTGATGTGTCTGAGGTGCTCAAACTTTTACCTGTCAAGTCCCTTTCTTCTAAGATCGTGACAAAGAGGTCCAATTTGTCGCTGGAGAAGTTCTTGAAAGATCATTACCTGACTGGTACCCCAGTTATTATCAGTGATTGTATGGCTCATTGGCCGGCCAAGATGAAATGGAATAACATAGATTACTTGCTGAGAGTTGCTGGTAACCGCACAGTTCCGGTTGAGGTTGGCAAGAACTATCTATGTGCAGAGTGGAAGCAAGAGCTAATTACATTTTCTGAGTTTCTTCAGCGTATAAAGTCCAATGACTGTTCTCCCGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAAATAAATGAGCTTCGGAAAGATATCTTTATCCCTGACTATTGTTTTACTGGTGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCGGCTGGAACAGTAACACCATTACATCATGATCCACATCATAACATACTAGCTCAGGTTGTTGGGAAGAAATACATAAGACTTTACTCTGCAGCATTGTCTGAGGAGCTTTTCCCCTACACTGAGACCATGCTTTGCAATTCCAGCCAGGTGGATTTAGATGACATAGATGAAAGCAAGTTTCCAAAGGTGAAAGAGTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGAGATGTTGTATATCCCTCCAAAATGGTGGCACTATGTGAGGTCTTTAACTGCCAGTTTCTCTGTTAGCTTTTGGTGGAGTGAGGGTGAATCTTCAGATGCATCCTAA 1260 0.4944 MSTPTTAPGGDSVSDEIETPTLDRESRALLQEISEHGGYAYVSMAAIGDFRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKHHHENGEFKEALRVLDMGIIMGGTLLRKDLDSAIEKVSERARRSTTRVSQGSCEGSGNSSERKTLVDREFDVSEVLKLLPVKSLSSKIVTKRSNLSLEKFLKDHYLTGTPVIISDCMAHWPAKMKWNNIDYLLRVAGNRTVPVEVGKNYLCAEWKQELITFSEFLQRIKSNDCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSAALSEELFPYTETMLCNSSQVDLDDIDESKFPKVKELEFVDCILEEGEMLYIPPKWWHYVRSLTASFSVSFWWSEGESSDAS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3226 419 Gene3D Cupin 176 411 - -
Aev04g3226 419 SUPERFAMILY Clavaminate synthase-like 181 411 - -
Aev04g3226 419 Pfam Cupin-like domain 188 412 IPR041667 -
Aev04g3226 419 MobiDBLite consensus disorder prediction 1 20 - -
Aev04g3226 419 ProSiteProfiles JmjC domain profile. 277 419 IPR003347 -
Aev04g3226 419 PANTHER - 35 412 - -
Aev04g3226 419 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 35 412 - -
Aev04g3226 419 SMART cupin_9 268 418 IPR003347 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3226 172 410 Acyl Lipid Metabolism Gene Families AT3G45880 23.986 4.16e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev04g3226 Cupin_8 1.7e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3226 K24444 - gmx:100813075 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3226 04 31542204 31545681 Aev04g3226 04 31542204 31545681 ECH