Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3218 ATGGAATCAGATCTTCAGCAGCACCCTCCAATGTTTTTGGACCATCACCACCACCACCACCACCAGCACCAACACCAGCAGATGAATTCGGGGCTAACGAGGTTCCGATCGGCACCAAGTTCATATTTTTCCAACATAATTGACAAGGAGTTCTACGACAGCATCTTCAACAACAAGCCATCGAGCCCCGAAACAGAGAGAATCTTCGCAAGGTTCATGAATAGCCTTAGCAACGATGAAGGTGTTGCTTCAGCTTCAGCTACAGAACCAGAACAGGACTCATCACTTGATAATAAGAATCTTGCACCTGTTCAGCAACAACAAATCCCTGTGGTGAAGCAAGAAGTGATTAATAATAACAATAATAATAGTAGTAACCTTCAGCCTCAGGCTTTGGCTCCAATGAATAATGAAACCGTGATTCTTCAGCAGCAACAACAACAACAGAGGAATATTGGTAGTAATTATGGATCTTCAGGGGCCCCTAGTCAGAGTTTTTACCAAAGTTCTGGAAGACCACCTTTGCCGAATCAGATGAAAACTGGTCGTGGAAATGCTTCTAATCTTATTAGGCATGGTAGTTCACCTGCAGGATTGTTTTCAAACATAAACATTGAAGGGTATGCTGCTGCTATAAGAGGAATGGGAACCATGGGAGCCGGTAGTAACAAAACTAGTGAGGATGCAAGTTTTTCTCCTGCAACCAGATTGAAGAAGAATAATGCACAAGGGTATTCTTCTTCAGGGCTAATGTCTCCAATAGCTGAAATTAGGAACACAAACAATACAGAGAATGAAGCTTTTGGGGAGAGCCAGCAGCAAGGAAATGATTTTATCTCAGGTTTACCTGTTAGTTCTTGGGATGACTCTTCTTCAATGATCTCTGACAACATCACTGGATTGAAAAGATACAGAGAAGAGGATGTGAAACCATTTTCTGCCTTAAATCCAGCACCTGAAACACAGAATGAAACAGGAGGAGGGCAAGGTTGTGCAGCACCATTATCTCACCAGTTGAGTATGCCAAACACTTCAGCAGAAATTGCAGCCATTGAGAAGTTTCTTAACTGCTCATCAGATTCTGTTGTATGCAAAATTCGTGCCAAGCGTGGTTGTGCCACTCACCCTAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATTAGTGAGCGAATGAGGAAACTACAAGATCTGGTCCCGAACATGGACAAGCAAACAAACACTGCAGACATGTTGGACTTGGCTGTTGAGTACATCAAAGACCTTCAAAAACAAGTTGAGACTCTTTCGGACAGTCACGCTAAGTGTACGTGCTCACACAAGCAGCAGCATCAATAA 1338 0.4297 MESDLQQHPPMFLDHHHHHHHQHQHQQMNSGLTRFRSAPSSYFSNIIDKEFYDSIFNNKPSSPETERIFARFMNSLSNDEGVASASATEPEQDSSLDNKNLAPVQQQQIPVVKQEVINNNNNNSSNLQPQALAPMNNETVILQQQQQQQRNIGSNYGSSGAPSQSFYQSSGRPPLPNQMKTGRGNASNLIRHGSSPAGLFSNINIEGYAAAIRGMGTMGAGSNKTSEDASFSPATRLKKNNAQGYSSSGLMSPIAEIRNTNNTENEAFGESQQQGNDFISGLPVSSWDDSSSMISDNITGLKRYREEDVKPFSALNPAPETQNETGGGQGCAAPLSHQLSMPNTSAEIAAIEKFLNCSSDSVVCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQKQVETLSDSHAKCTCSHKQQHQ* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3218 445 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 18 442 - -
Aev04g3218 445 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 442 - -
Aev04g3218 445 MobiDBLite consensus disorder prediction 142 190 - -
Aev04g3218 445 SMART finulus 378 428 IPR011598 GO:0046983
Aev04g3218 445 Pfam Helix-loop-helix DNA-binding domain 377 423 IPR011598 GO:0046983
Aev04g3218 445 Gene3D - 373 445 IPR036638 GO:0046983
Aev04g3218 445 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 375 436 IPR036638 GO:0046983
Aev04g3218 445 MobiDBLite consensus disorder prediction 1 23 - -
Aev04g3218 445 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 372 422 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3218 Aev-Chr4 31496560 31499827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3218 1 439 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.686 2.97e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g3218 HLH 4.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3218 - - adu:107476789 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3218 04 31496560 31499827 Aev04g3218 04 31496560 31499827 ECH
Aev10g1757 10 19612278 19614493 Aev04g3218 04 31496560 31499827 ECH
Aev06g1268 06 8430301 8433671 Aev04g3218 04 31496560 31499827 ECH
Aev02g1554 02 17201032 17205301 Aev04g3218 04 31496560 31499827 ECH