Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3211 ATGAATAACTCATCATCAAACAACTGGCTTTCCTTCCCTCTTTCTCCTACTCATCATCATTCTTCCTTACCTTCTCATGATATTCAGAATGCAACAACTCATCAGTATCATCAATTTCCCCTTGGATTAATGACCGACAACTTGGAAAACCCTTTCCAAAATCATGAATGGAATGTGATGATGAATAGTAGTCATGAGAGCAGCAATGAAGTTCCAAAAGTTGCAGATTTTCTTGGTGTTAGCAAGTCAGAGAATATTAATCACTCATCTTCAGATCTTGCTGCTGCTCTCAATAACAATAATTCAGATCATTGTTACTTGTTCAATAATAACACTAATCTCATGATGATGCCGATACAAAACAACAACACATTATTATCAGTGGCTACATCAAGCAATAACTATGATGATGATGATCAGTATCATCAAAAGAATACTAATGCTAATAGTAATAGCTTGCAATCGTTGACATTGTCCATGGGAAGTAGTGGTGATGGTATTAAGGATTCAGCTACATGTGAAACCACAAGCTGTGACAACAATAATAGTACCAATACCACTACTACTAATGTTGAAGCTCCAACTCCTAGAAGAACTTTGGATACCTTTGGACAGAGAACATCAATATATCGCGGTGTAACAAGACATAGATGGACCGGAAGATATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGTCGCCAAGGTGGATATGACAAAGAAGATAAAGCAGCTAGGGCTTATGATTTGGCTGCACTAAAGTACTGGGGGACATCCACTACGACCAACTTTCCTATAAGCAAATATGAGAAGGAATTGGATGATATGAAGCACATGACAAGACAAGAATTTGTGGCTGCCATAAGAAGGAAAAGCAGTGGATTCTCCCGGGGTGCATCAATGTATCGTGGAGTTACAAGGCATCACCAACATGGGAGATGGCAAGCTAGGATTGGCAGGGTGGCTGGAAACAAAGATCTCTACTTGGGAACTTTTAGTACTGAGGAAGAGGCAGCAGAAGCATACGACATAGCGGCGATAAAGTTCAGAGGACTGAACGCAGTCACAAACTTTGACATGAGCCGTTACGACGTTAAAGCCATTCTGGAAAGCAGCGCTCTCCCTATCGGTGGCGGCGCTGCAAAAAGACTCAAAGAAGCTCAAGCTTTGGAATCTTCTAGAAAGCGCGAACACTTATTTGCACTTGCTGCTGCCGCCTCATCATCCTCAATTACTGCTTCTACCCCTTCTCTCGTTCATCATCAGGATTACCCAATTACTTCTTCTCTCATTCACCACCACCAACCATTGAACAACAACAACAACATTGCTTCTCATCATTATCATCAGAGTTATCTCCAAACGCAGCTTCAATTGCACCAACAACAGAGTCCTCACTTTTACAATAGTTATTACCTTCAGGGAATCATGAACAACATGGGCTCTTCTTCTTCCTCTTCATCTTTAATGGATCATAATCATAATCATAATAGTACTAGTCATGTTGGAGGGTTTGTTGGGAACATGCTTGGTATGGCTTCCAATTCTTCTTCAGCACCGGAGGAACTTGGGTTGGTTAAGGTTGATTATGACGGTTATGGCAGTTATGGTGGTTGGTCGACCGCAACGACAGCAACGACGGGGGAGTCCATGCAGGCACCCAATGGTGGTGCATTTTCAACGTGGAATGAATGA 1716 0.4178 MNNSSSNNWLSFPLSPTHHHSSLPSHDIQNATTHQYHQFPLGLMTDNLENPFQNHEWNVMMNSSHESSNEVPKVADFLGVSKSENINHSSSDLAAALNNNNSDHCYLFNNNTNLMMMPIQNNNTLLSVATSSNNYDDDDQYHQKNTNANSNSLQSLTLSMGSSGDGIKDSATCETTSCDNNNSTNTTTTNVEAPTPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPISKYEKELDDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESSALPIGGGAAKRLKEAQALESSRKREHLFALAAAASSSSITASTPSLVHHQDYPITSSLIHHHQPLNNNNNIASHHYHQSYLQTQLQLHQQQSPHFYNSYYLQGIMNNMGSSSSSSSLMDHNHNHNSTSHVGGFVGNMLGMASNSSSAPEELGLVKVDYDGYGSYGGWSTATTATTGESMQAPNGGAFSTWNE* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3211 571 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 569 - -
Aev04g3211 571 SUPERFAMILY DNA-binding domain 307 368 IPR016177 GO:0003677
Aev04g3211 571 Gene3D AP2/ERF domain 209 274 IPR036955 GO:0003700|GO:0006355
Aev04g3211 571 Gene3D AP2/ERF domain 308 368 IPR036955 GO:0003700|GO:0006355
Aev04g3211 571 CDD AP2 208 274 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 ProSiteProfiles AP2/ERF domain profile. 308 366 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 ProSiteProfiles AP2/ERF domain profile. 209 272 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 8 569 - -
Aev04g3211 571 MobiDBLite consensus disorder prediction 551 571 - -
Aev04g3211 571 SUPERFAMILY DNA-binding domain 208 274 IPR016177 GO:0003677
Aev04g3211 571 SMART rav1_2 209 278 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 SMART rav1_2 308 372 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 Pfam AP2 domain 209 264 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 Pfam AP2 domain 309 358 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 PRINTS Ethylene responsive element binding protein signature 348 368 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 PRINTS Ethylene responsive element binding protein signature 210 221 IPR001471 GO:0003700|GO:0006355
Aev04g3211 571 CDD AP2 307 368 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3211 Aev-Chr4 31435921 31439555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3211 6 571 AP2-EREBP Transcription Factor Family AT1G51190 57.903 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aev04g3211 AP2 1.7e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3211 K09285 - gmx:100788471 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3211 04 31435921 31439555 Aev04g3211 04 31435921 31439555 ECH