Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3210 ATGTTTTGTGGGAATCTTATCCGGATCACTATCAACGTCAAATGTTTAATACTACCAAGATCAATTGAGGAGGAGATCATCGCAATTCAATGGTGGAGATCATTGTCATCAACACCACCAACAACACCAATGATACAAAGAGGAGTGACTACTACTACTGCTGCTCATCATCATGGTCGCTCTGGGGATGTAATAATTGCGAGTGTTATGGCAGAGAGGGAACGATATAGGAATAATGATAATGACACAGGGTCTGTGTTAGATTATTCTTCTTCTTCTTTTTGTTGCAAAGCACGAAATGCTAGGATTGCTATCAAAACCTTGCCTCCAATTAAGAGCTTTAGTAGTAGTGATGATGAAGAACAACATTGCTGTCCTATTTGCATGGAGAATTTTAAGGATGGGGAGTTGATTCAGCCTTTTGGACTTTGTGTTCATGAATTCCATTCCTCTTGCCTTTATTCTTGGTTGCATAGTGGAAACACTACTTGTCCTATTTGCCGTGAAGATTTATCTACCACTATCAAAATTAAAGGCAAAACAACATAA 549 0.3862 MFCGNLIRITINVKCLILPRSIEEEIIAIQWWRSLSSTPPTTPMIQRGVTTTTAAHHHGRSGDVIIASVMAERERYRNNDNDTGSVLDYSSSSFCCKARNARIAIKTLPPIKSFSSSDDEEQHCCPICMENFKDGELIQPFGLCVHEFHSSCLYSWLHSGNTTCPICREDLSTTIKIKGKTT* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3210 182 PANTHER OS06G0666500 PROTEIN 99 174 - -
Aev04g3210 182 Pfam Ring finger domain 125 168 IPR001841 -
Aev04g3210 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 176 IPR013083 -
Aev04g3210 182 ProSiteProfiles Zinc finger RING-type profile. 125 168 IPR001841 -
Aev04g3210 182 SUPERFAMILY RING/U-box 105 174 - -
Aev04g3210 182 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 99 174 - -
Aev04g3210 182 SMART ring_2 125 167 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3210 Aev-Chr4 31434513 31435061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3210 114 168 C3H Transcription Factor Family AT4G38140 40.000 2.93e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3210 - K15692 adu:107470824 121.324