Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3209 ATGCATCCAGTATTGGGTTTAATTCTATGGATTCTTTTTATAAGTGCACTCATGTATCTATGGCCATCCGGTGACTTCATACCCGCTGTTTTCTTGTTCGGATTCATGACATGCATCGCCATCAACTTGCCCTCACTCTCAACACCATTGTACCCCGAGTGGATCGATTATTGGACCGCGGAGGAGGAGGAAGGCCGCGGCCGCGAACAGGAGATCGAGATGATCCCAATTGATGGATGGGGACGGGCACGAACAATGGCACCAAGGCTGGATGATCATCAGTTTTGGGTAATTGGAACAGCTGAGAGGGGACAACATACGCATAACGAGTCACCTTATTCTTTGATTGGCCAAAGAGCTATAAGAACATTGCCTCCGGTGAAGAGCTTCACTCAAAATGTTAGATCTGGTGATGAATATTGCTGTCCTATTTGCAAGGAGAATTTTAAGAATGGAGAGTTGATTCAGCCTTTTCCAATTTGTTCTCATGAATTTCATTCTTCTTGCCTCTATTCTTGGTTTCATACGGGAAAGACTAATTGCCCTGTTTGCCGTCAAGATCTAAGCTAA 570 0.4474 MHPVLGLILWILFISALMYLWPSGDFIPAVFLFGFMTCIAINLPSLSTPLYPEWIDYWTAEEEEGRGREQEIEMIPIDGWGRARTMAPRLDDHQFWVIGTAERGQHTHNESPYSLIGQRAIRTLPPVKSFTQNVRSGDEYCCPICKENFKNGELIQPFPICSHEFHSSCLYSWFHTGKTNCPVCRQDLS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3209 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 189 IPR013083 -
Aev04g3209 189 SUPERFAMILY RING/U-box 132 188 - -
Aev04g3209 189 SMART ring_2 142 184 IPR001841 -
Aev04g3209 189 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 115 188 - -
Aev04g3209 189 ProSiteProfiles Zinc finger RING-type profile. 142 185 IPR001841 -
Aev04g3209 189 PANTHER OS06G0666500 PROTEIN 115 188 - -
Aev04g3209 189 Pfam Ring finger domain 142 185 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3209 Aev-Chr4 31432866 31433435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3209 116 185 C3H Transcription Factor Family AT5G41440 38.571 1.18e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3209 - - aprc:113865236 99.7525