Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3202 ATGAGTATAGGTAGTGAGAAAGGAAAGGGACAGGACATGGACATGGTAGATGGAATTGAAAGAAAGAGAGTAGTGAAGAGGCATCAACAAGATGAAGATCTTGTTGAATCTTCTCCATCATTAAGAATATCATCAAACAATGGCTATTATTCTTTGGATAATAATAATAATAATGAAGAAGAAGATAGTGTGAATGTGGCTTTGCACTTAGGGCTTCCAAACACACACTTTTGTTCAGATCACAAGGAAGGGAAGAAAGTAGAAGTAACTACTAGTGTTGCTTATTCTGGGGAGGATCTGATAGCAAATAATAATAATAATAATAATGGGATCAGAGGACAGTATTGGATCCCTACACCGACTCAGATCCTGATTGGTCCAACACAGTTCGCATGCCCACTTTGTTTCAAGACATTCAACAGATACAATAACATGCAGATGCATATGTGGGGGCATGGATCTGAGTACAGAAAGGGGCCAGAATCTCTAAGAGGAACACAACCAACGGCGATGCTAAGACTGCCATGTTACTGCTGTGCACCCGGGTGCAAGAACAACATCGAGCACCCGAGAGCAAAGCCTCTCAAAGACTTCAGAACCCTTCAAACTCACTACAAGAGGAAGCACGGAATAAAGCCCTTCGCGTGTAGGAAATGCTCCAAGGCCTTTGCTGTGAGGGGTGATTGGAGGACTCATGAGAAGAATTGTGGCAAGCGTTGGTATTGTTCTTGTGGCTCTGATTTTAAGCATAAGCGATCTCTTAAGGATCATATTAAGGCATTTGGGCATGGACATGAAGAATCTGCTATTGTTAATGGATCAATTGATGATTCATCGTGTCTTGATCATCAAGATGATGATTATGATGATGATGCCTCTGAAGTTGAAGAGAATAATGATGATGAATCATTACAACACTAG 921 0.4104 MSIGSEKGKGQDMDMVDGIERKRVVKRHQQDEDLVESSPSLRISSNNGYYSLDNNNNNEEEDSVNVALHLGLPNTHFCSDHKEGKKVEVTTSVAYSGEDLIANNNNNNNGIRGQYWIPTPTQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSEYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFACRKCSKAFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGHGHEESAIVNGSIDDSSCLDHQDDDYDDDASEVEENNDDESLQH* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3202 306 PANTHER ZINC FINGER PROTEIN WIP2 45 297 - -
Aev04g3202 306 SUPERFAMILY beta-beta-alpha zinc fingers 125 153 IPR036236 -
Aev04g3202 306 PANTHER ZINC FINGER PROTEIN WIP2 45 297 IPR043584 GO:0003700|GO:0010468
Aev04g3202 306 ProSiteProfiles Zinc finger C2H2 type domain profile. 130 157 IPR013087 -
Aev04g3202 306 SUPERFAMILY beta-beta-alpha zinc fingers 196 234 IPR036236 -
Aev04g3202 306 ProSitePatterns Zinc finger C2H2 type domain signature. 132 152 IPR013087 -
Aev04g3202 306 MobiDBLite consensus disorder prediction 277 306 - -
Aev04g3202 306 SMART c2h2final6 214 234 IPR013087 -
Aev04g3202 306 SMART c2h2final6 130 152 IPR013087 -
Aev04g3202 306 SMART c2h2final6 240 263 IPR013087 -
Aev04g3202 306 MobiDBLite consensus disorder prediction 282 298 - -
Aev04g3202 306 Gene3D Classic Zinc Finger 177 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3202 Aev-Chr4 31408931 31415455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3202 64 305 C2H2 Transcription Factor Family AT3G57670 63.603 7.02e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g3202 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3202 - - gmx:100789416 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3202 04 31408931 31415455 Aev04g3202 04 31408931 31415455 ECH
Aev10g1765 10 19679348 19681966 Aev04g3202 04 31408931 31415455 ECH
Aev06g1283 06 8567394 8570519 Aev04g3202 04 31408931 31415455 ECH
Aev10g1765 10 19679348 19681966 Aev04g3202 04 31408931 31415455 PCT