Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3197 ATGAAGGAAGGGCAAGGGGGTGGAGGAGGTAGGAAACAGGGTGCAGCATCACCTTGTGCTGCATGCAAGCTTCTAAGAAGAAGATGCGCCCAAGATTGTGTTTTTGCGCCCTATTTCCCTGCTGATGAGCCCCAGAAGTTTGCTAATGTCCACAGGGTTTTTGGTGCAAGCAATGTCAACAAGATGCTTCAGGACCTACCGATGCATCAGCGAAAGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCTAGAGTCCGGGACCCGGTGTATGGGTGTGTAGGTGCAATTTCTTCACTTCAACAACAAATTGATGTTCTTCAAACCCAATTAGCCCTAGCCCAAGCTGAGGTGGTTCACCTTAGGATGCGCCAAACAACTTGCCTTTCTAATCCTAGGGTTGGTCCCAATAGCCCAACAAATAGTGGGTCCCCACCCTCCAAGATGATGGACTCACAAGCCAAGCCTATTTTTGACATGGACATGGTGGTGGACCAAGCCAACTATGGTGATTCAATATGGTCATGA 528 0.4905 MKEGQGGGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHRVFGASNVNKMLQDLPMHQRKDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRMRQTTCLSNPRVGPNSPTNSGSPPSKMMDSQAKPIFDMDMVVDQANYGDSIWS* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3197 175 MobiDBLite consensus disorder prediction 129 149 - -
Aev04g3197 175 Pfam Lateral organ boundaries (LOB) domain 18 115 IPR004883 -
Aev04g3197 175 Coils Coil 97 124 - -
Aev04g3197 175 MobiDBLite consensus disorder prediction 129 152 - -
Aev04g3197 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 172 - -
Aev04g3197 175 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
Aev04g3197 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 10 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3197 Aev-Chr4 31365066 31367746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3197 11 175 AS2 family AT1G31320 77.711 5.34e-75 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev04g3197 LOB 1.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3197 - - gmx:100794219 287.345