Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3186 ATGGAGGATTCCGAGGGAGTCCTCAGCTTCGATTTCGAGGGCGGCCTCGATGCCGCTCCCGCCGCAGCTGCCACCGCCGCCGCGCCCTCCGTCGGACCCCTCACCAGCAATAACCACGATTCCTCTGCTGCCGCCTCCGCCATCCCCAACGGCGCCGCCGCGGGACCAGCTGCGCCCTCCCCTGCCGACCCCGCGGCGGCCGGGAACGCCCCAGGACGGAGGAGCTTCCGGCAGACGGTGTGCCGGCACTGGCTGAGGAGCCTGTGCATGAAGGGGGACGCGTGCGGGTTCCTGCACCAGTACGACAAGGCGAGGATGCCTGTGTGCCGGTTTTTCCGGCTGTTTGGGGAGTGCCGCGAGCAGGACTGCGTCTATAAGCATACCAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCCAATGGGCCTGATTGCCGATATAGGCATGCAAAATCTGCTGGGCCTCCACCTCCTGTTGAAGAGGTCCTTGCAAAGATCCAGCATTTATATTCTTACAACTTCAATGCCTCTAACAAGTTTTTCCAACAAAGGGGTGCTAACTATACCCAACACATTGAAAAATCTCAACTTCCGCAAGGAAATAATTCTACAAACCAAGTTGTTGCTGGAAAACCATTACCAGCAGAGTCAGGTAATGTCCAGCAGCAGCAACAAGTTCAACAGCCTCAGCAGCAGGTCAACCAGAGCCAAATGCAAAATGTTGCTAATGGCCAGCCCAATCAAGTGAATAAAACTGCAACTCCTTTACCGCAAGGAACATCTAGGTATTTTATTGTTAAAAGTTGCAATCGTGAAAATTTGGAGTTATCAGTACAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCCAAACTAAATGAAGCTTTTGACTCTGTAGATAATGTGATACTGGTTTTCTCAGTCAACCGGACTCGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTGCTGGGGGGAACTGGAAATATGCTCATGGAACTGCACATTATGGGCGGAATTTCTCTGTTAAATGGTTGAAGTTATGTGAACTGTCATTCCATAAAACCCGCCATTTAAGGAATCCATACAATGAAAATTTACCGGTGAAGATAAGTAGAGATTGTCAGGAGTTAGAGCCCAGTATTGGTGAGCAGTTGGCATCATTGCTTTATCTTGAGCCGGATAGTGAGCTTATGGCCATCTCAGTTGCAGCAGAGTCTAAACGAGAAGAAGAGAAAGCGAAGGGAGTTAATCCAGATAATGGAGCAGACAATCCAGATATTGTCCCATTTGAAGACAATGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGAGGAGAGCTTTACTCATGGCATTGGGCCTGCTGGTCAAGGCAGAGGTAGGGGCAGAGGCATGATGTGGCCGCCTCACATGCCTCTTGCACGTGGTGCCAGACCTATGCCTGGTATGCCAGGTTTTAACCCAATGATGATGGGTGATGGTTTATCTTACGGGCCTGTTGGGCCTGATGGATTTGGTATGCCTGATCTTTTTGGTGTTGGCCCTCGTGGTTTCGCTCCATATGGTCCTAGGTTCTCTGGTGATTTTGCAGGGCCCCCAGCAGCCATGATGTTTCGTGGACGACCCTCACAACCCGGGATGTTTCCTGGTGGTGGGTTTGGGATGATGATGAATCCCGGACGTGGTCACTTTATGGGTGGGATGGGGGTCCCGGGTGCAAATCCACCAAGAGGTCGACCAGTCAATATGCCTCCAATGTTTCCACCACCTCCGCCTCTGCCACAGAATACCATGCGTCCTGTCAAGAGAGATCAAAAAACTAATGATCGAATTGACAAATTCGGTTCAGGACTAGAGCAGGGCAAGAGTCAAGACATGCAGAGTCAAAGTGGTGGACCTGACGATGAAATGCAATACCAGCAAGGATACAAGCCACAGCAAGATGATCTGTATCCTGCCAATAACAACTTAAGGAATGACGACAGTGAAAGCGAGGATGAGGCACCTCGGCGGTCGAGACATGGAGAGGGGAAGAAGAGAAGGCGAAGCTCGGAAGATGCTAATGCAAGCTCTAATCACTAG 2115 0.5031 MEDSEGVLSFDFEGGLDAAPAAAATAAAPSVGPLTSNNHDSSAAASAIPNGAAAGPAAPSPADPAAAGNAPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLFGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSAGPPPPVEEVLAKIQHLYSYNFNASNKFFQQRGANYTQHIEKSQLPQGNNSTNQVVAGKPLPAESGNVQQQQQVQQPQQQVNQSQMQNVANGQPNQVNKTATPLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVDNVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPDNGADNPDIVPFEDNEEEEEEESDEEEESFTHGIGPAGQGRGRGRGMMWPPHMPLARGARPMPGMPGFNPMMMGDGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFAGPPAAMMFRGRPSQPGMFPGGGFGMMMNPGRGHFMGGMGVPGANPPRGRPVNMPPMFPPPPPLPQNTMRPVKRDQKTNDRIDKFGSGLEQGKSQDMQSQSGGPDDEMQYQQGYKPQQDDLYPANNNLRNDDSESEDEAPRRSRHGEGKKRRRSSEDANASSNH* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3186 704 Pfam YT521-B-like domain 265 327 IPR007275 GO:0003723
Aev04g3186 704 Pfam YT521-B-like domain 344 399 IPR007275 GO:0003723
Aev04g3186 704 ProSiteProfiles YTH domain profile. 265 400 IPR007275 GO:0003723
Aev04g3186 704 MobiDBLite consensus disorder prediction 30 45 - -
Aev04g3186 704 MobiDBLite consensus disorder prediction 199 241 - -
Aev04g3186 704 MobiDBLite consensus disorder prediction 27 72 - -
Aev04g3186 704 MobiDBLite consensus disorder prediction 578 704 - -
Aev04g3186 704 MobiDBLite consensus disorder prediction 631 669 - -
Aev04g3186 704 Gene3D - 69 131 - -
Aev04g3186 704 SMART c3hfinal6 75 101 IPR000571 GO:0046872
Aev04g3186 704 SMART c3hfinal6 103 129 IPR000571 GO:0046872
Aev04g3186 704 SMART c3hfinal6 131 155 IPR000571 GO:0046872
Aev04g3186 704 ProSiteProfiles Zinc finger C3H1-type profile. 75 102 IPR000571 GO:0046872
Aev04g3186 704 SUPERFAMILY CCCH zinc finger 76 106 IPR036855 GO:0046872
Aev04g3186 704 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 1 696 - -
Aev04g3186 704 Gene3D ph1033 like domains 243 403 - -
Aev04g3186 704 MobiDBLite consensus disorder prediction 613 627 - -
Aev04g3186 704 ProSiteProfiles Zinc finger C3H1-type profile. 129 156 IPR000571 GO:0046872
Aev04g3186 704 MobiDBLite consensus disorder prediction 439 457 - -
Aev04g3186 704 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 696 IPR045168 -
Aev04g3186 704 MobiDBLite consensus disorder prediction 588 608 - -
Aev04g3186 704 MobiDBLite consensus disorder prediction 415 477 - -
Aev04g3186 704 MobiDBLite consensus disorder prediction 670 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3186 Aev-Chr4 31279221 31285245 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev04g3186 YTH 2.3e-44 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3186 K14404 - gmx:100802826 1102.43