Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3169 ATGGAGTCATCTGAAGATCATGATCATGATCAACAACCAACATCAGAAAAGCTTATTACTACTACCGATGGTGGTGATGATAATAAAGTGACTTCAATTGTTAAGTCTTATGAGTGCAATTTCTGCAAGAGAGGATTCTCTAATGCACAAGCACTTGGAGGGCACATGAACATCCACAGGAAAGACAAAGCAAAACTAAAGCAACAATCAAATTCATCATCAAAACTCATCATCACCACTCAACAACCTCAATTGGACATTATTCATCAACATCAAATATTGAATCGAAGCAATAATGTTATTGATCCAATAAACTTGCCTTATTGGAATAATGTGTCTCATCATCATGATCACTCTCAATCAAGAGAAGACAACCTTGTTCTCCCACTCTTTGTTGAATCGGCCGATAGCCGTGAACCGCTGCGGCTGCCGGAGGGTTCATCACCGGAGATAGACCTTGAATTGAGGCTAGGGAATGATCCACAACATGACTACTCATCAACGGGTACTAGAAAATTCCTTTGA 525 0.3981 MESSEDHDHDQQPTSEKLITTTDGGDDNKVTSIVKSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSNSSSKLIITTQQPQLDIIHQHQILNRSNNVIDPINLPYWNNVSHHHDHSQSREDNLVLPLFVESADSREPLRLPEGSSPEIDLELRLGNDPQHDYSSTGTRKFL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3169 174 SUPERFAMILY beta-beta-alpha zinc fingers 35 64 IPR036236 -
Aev04g3169 174 MobiDBLite consensus disorder prediction 139 174 - -
Aev04g3169 174 MobiDBLite consensus disorder prediction 1 25 - -
Aev04g3169 174 PANTHER OS07G0101800 PROTEIN 9 122 - -
Aev04g3169 174 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 122 - -
Aev04g3169 174 Pfam C2H2-type zinc finger 37 61 - -
Aev04g3169 174 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Aev04g3169 174 Gene3D Classic Zinc Finger 10 93 - -
Aev04g3169 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3169 Aev-Chr4 31178924 31179448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3169 32 170 C2H2 Transcription Factor Family AT3G53820 39.161 3.10e-18 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g3169 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3169 - - vun:114170729 119.783