Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3161 ATGGGTGAGGAAGTTAGGATGAGCGATTACCAAGACGACGAGCGGGTCTCGGACTGGGAATTGGGCCTGCCCGCGGCCCACGATCTCACTCCTCTCTCTCAGCTCCTCATCCCGCCGGAGCTTGCCTCCGCCTTCAGCATCTCGCCGGAGCCCAATCGGACCTTCCTCGACGTCAACCACGCCTCCCGGAACACCGTCTCCACCCTCCGCGGCAGCGCTCAGGCATTCTCCACCTCCCTCGCTACCACCATCAACAATCTCAATCCCTACCCCGACGGCGATGATGATAATCTCGACGGCATCGAAGAAGAAGAGATCGATCCGAACGATTCGCGGAAGCTGCGGAGGATCGATTGCGCAGAGGAAGCTGATTCGGCGCCGCGCAACGACGGAGGTGGCGGCGGCGTCGGGACGGTGAAGCGGCCGCGGCTGGTGTGGACGCCGCAGCTGCACAAGAGGTTCGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTTCCGAAGACGATCATGCAGCTGATGAACGTTGAAGGTTTGACTCGAGAGAACGTCGCAAGTCATCTCCAGAAGTATCGGCTTTACTTGAAGAGGATGCAGGGGCTCTCTGCGGAAGGACCTTCTTCCTCCGACCACCTGTTTGCCTCCACGCCGGTGCCGCAGAGCTTGAATGAGAGTGGCGGTGGCGGTGGCGGAAGTGGGCACTCCCATGGGAACGGCCACCACCTCCACGTTCCGGTTCATGTGCCGTACCCCCCGCCGCCGCCGCCGCCGCCGATGATGCAAATGCCTGTGATCGGAATGCCACATGGACATGGCGGGTACCATCATGGGTTTGAACCCCATTCGTACAAGTATGCTTCTGCTGTGTCTTACCCTCATGCTGCTCCTAATGAGAAATGA 903 0.6047 MGEEVRMSDYQDDERVSDWELGLPAAHDLTPLSQLLIPPELASAFSISPEPNRTFLDVNHASRNTVSTLRGSAQAFSTSLATTINNLNPYPDGDDDNLDGIEEEEIDPNDSRKLRRIDCAEEADSAPRNDGGGGGVGTVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSAEGPSSSDHLFASTPVPQSLNESGGGGGGSGHSHGNGHHLHVPVHVPYPPPPPPPPMMQMPVIGMPHGHGGYHHGFEPHSYKYASAVSYPHAAPNEK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3161 300 MobiDBLite consensus disorder prediction 87 110 - -
Aev04g3161 300 SUPERFAMILY Homeodomain-like 138 198 IPR009057 -
Aev04g3161 300 MobiDBLite consensus disorder prediction 205 229 - -
Aev04g3161 300 Pfam Myb-like DNA-binding domain 145 193 IPR001005 -
Aev04g3161 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 142 194 IPR006447 GO:0003677
Aev04g3161 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 138 197 IPR017930 -
Aev04g3161 300 Gene3D - 138 200 - -
Aev04g3161 300 MobiDBLite consensus disorder prediction 205 256 - -
Aev04g3161 300 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 288 - -
Aev04g3161 300 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 288 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3161 Aev-Chr4 31145205 31146107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3161 1 277 G2-like Transcription Factor Family AT3G46640 55.401 5.45e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev04g3161 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3161 - - aprc:113858844 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3161 04 31145205 31146107 Aev04g3161 04 31145205 31146107 ECH