Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3152 ATGATCTCTGCAGATTCCATGGTGGAGAATTATCCTGGTTTAAGGAATGGATTCAAATTTGAGAACGGTCCAATCTCAGTGTTCTCGAATCAGAATCAAGGAAAAGGGTTCAAGTTCAATGATTCATCTTCCCCTTCTGACCAATCAAACCGCTCAGATTCTCCTTGTGATTCTGGTGCCACAACCTCAAATAATGGAGATCACGCAGAGAGCACCAAGTATTCAAACCCTATCCTCAGATACATAAGCGAGATCCTCATGGATGAAGAAGATGATTTGGAGAGAAAACCTTGTATGTTGCAGGATTGTTTGAAACTCCAAGCTGCTGAGAAATCATTCTATGATGTATTGGGTAGTGGTGGCCATGACCCTGATGATGATAATAATAATAATAATAATTCTGGTGGAACTACTAGTTCTGAGAGCAATACTTGCAGCTACTCCACTGATAATTCTTCCTCATATGAGTCTGATTGGGTGAATGGTGGTGCTGATTTTGAGTCTTCTTTCCTTCATAGGTCTCTTGTTGGGTCCAAAGAAAACGCCTGTGAGGTGTTTGATGTAATACCTAATAATCAATTTAGGGATTTACATGGTTCTGCTCATTTTCAAAATGGAACTTTGAATAATATCTTTCAATCATTAAGTATCCCACCAAAGACTCAAGCATATAGGGGAACAAGGGAAAAGCGAGGCCATAGTATTGATGATGTCACAAATGAAGAAGGGGAAAGAGGAACCAAACTCTCAGCTCTGTACAATGATGATTCTGAGACATCATTAGAGATGTTTGATGAGGTGCTGCTTTGTAGGGATGGGAAGAGTCCTGCCATTTTTTGTGCCGACCGTGGACCGTACTCGCCGGTTGTTGCTGATTCAAGTGGATCTAATGGAAAGACAAGCCGTTCGAAGAAAGGTACCAACAAAGGGGGAGCCACGAGTTCTTCTACAGCTGTAGATTTATGGACTCTCTTAACTCAGTGTGCACAAGCTGTGGCAAGCTATGACCAGAGGAGTGCAAGTGAGATACTCAAGCAGATTAGGCAGAACTCTTCGCCTTCTGGCGATGGATTACAGCGTTTGGCTAATTACTTTGCCATTGGCCTTGAGACAAGGTTAGCTGCTGGGACACCAAAGTATGTGCTCCTTCAGTCTGCATCTGCTGCAGATATGTTAAAGGCTTACAAAGTGTACATAACAGCATCTCCATTTCAAAGGATGTCGAATTTCTTGGCTAACAGAACTATTCTGAAGCTAGCAGAGAATAAGAGCAGCCTTCACATCATTGACTTTGGTGTTTTCTATGGTTTTCAGTGGCCTTGCCTTATTCAGCGTCTTTCGGAAAGGCCTGGCGGGCCGCCAAGGCTTAGAATTACAGGAATTGATCTCCCTCAGCCTGGATTTAGGCCTACGGAAAGGGTTGAGGAGACGGGGCGGCGCCTGAGGAACTACTGCAAGAGGTTCAAAGTCCCGTTTGAGTACAATTGCCTTGCACAGAAGTGGGAAACCATAAAGCTTGAGGATCTCAAAATCGACAGGAATGAAGTGACAGTGGTTAGCTGTTTGTACAGATTGAAGAACCTATCTGATGAAACTGTGACTGTGAACTGTCCAAGAGATGCTGTGTTAAGGTTGATAAGGAGGATCAATCCAAACATGTTCATCCATGGCGTGGTGAATGGCACTTACAATGCACCGTTTTTCCTCACTAGGTTCAGGGAAGCACTCTTCCACTTCTCAGCATTGTTTGATATGTTCGAGGCCACCGTGCCCCGCGACGATCCACAAAGGCTCATGTTTGAGAAAGGGTTGTTTGGAAGGGATGCCATCAATGTCATAGCATGTGAAGGAGCTGAAAGAGTCGAAAGGCCAGACACCTATAAGCAGTGGCAAGTTAGGAACCAGAGAGCAGGTTTCAAGCAAATTCCAATTGCTCCAGAACTAGTGAATAGAGTCAAAGAGATGGTGAAGAAGGAGTATCATAAAGATTTTGTAGTGGATCAAGATAGCAAATGGATCTTGCAGGGATGGAAAGGGCGAATTCTTCATGCTGTTTCTGCTTGGGTTCCTGCTTAA 2076 0.4383 MISADSMVENYPGLRNGFKFENGPISVFSNQNQGKGFKFNDSSSPSDQSNRSDSPCDSGATTSNNGDHAESTKYSNPILRYISEILMDEEDDLERKPCMLQDCLKLQAAEKSFYDVLGSGGHDPDDDNNNNNNSGGTTSSESNTCSYSTDNSSSYESDWVNGGADFESSFLHRSLVGSKENACEVFDVIPNNQFRDLHGSAHFQNGTLNNIFQSLSIPPKTQAYRGTREKRGHSIDDVTNEEGERGTKLSALYNDDSETSLEMFDEVLLCRDGKSPAIFCADRGPYSPVVADSSGSNGKTSRSKKGTNKGGATSSSTAVDLWTLLTQCAQAVASYDQRSASEILKQIRQNSSPSGDGLQRLANYFAIGLETRLAAGTPKYVLLQSASAADMLKAYKVYITASPFQRMSNFLANRTILKLAENKSSLHIIDFGVFYGFQWPCLIQRLSERPGGPPRLRITGIDLPQPGFRPTERVEETGRRLRNYCKRFKVPFEYNCLAQKWETIKLEDLKIDRNEVTVVSCLYRLKNLSDETVTVNCPRDAVLRLIRRINPNMFIHGVVNGTYNAPFFLTRFREALFHFSALFDMFEATVPRDDPQRLMFEKGLFGRDAINVIACEGAERVERPDTYKQWQVRNQRAGFKQIPIAPELVNRVKEMVKKEYHKDFVVDQDSKWILQGWKGRILHAVSAWVPA* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3152 691 Pfam GRAS domain family 323 688 IPR005202 -
Aev04g3152 691 MobiDBLite consensus disorder prediction 31 72 - -
Aev04g3152 691 MobiDBLite consensus disorder prediction 290 314 - -
Aev04g3152 691 MobiDBLite consensus disorder prediction 124 149 - -
Aev04g3152 691 ProSiteProfiles GRAS family profile. 312 689 IPR005202 -
Aev04g3152 691 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 29 690 - -
Aev04g3152 691 MobiDBLite consensus disorder prediction 117 149 - -
Aev04g3152 691 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 690 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3152 Aev-Chr4 31089412 31091487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3152 74 690 GRAS Transcription Factor Family AT2G29060 45.972 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev04g3152 GRAS 8.3e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3152 - - lja:Lj3g3v3213190.1 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3152 04 31089412 31091487 Aev04g3152 04 31089412 31091487 ECH
Aev04g3152 04 31089412 31091487 Aev10g1803 10 19879929 19882352 PCT