Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3149 ATGGTGTCACAGAAGAGATTAGTCTACGGATTTAAAGACTATGAGCCACCAGCCATTCCTCGAGCCGCCCGATCAACTAGGAAGAGGGCCAAATTTCAGAGAAGAGTGGAAGATGATCAAATGGGTGCATTTGATTTATTGGCCGCCGTAGCTGGTAAGTTATTTTTCCAAGATAAAGAGAATCCAACAATGGCTAGTGATACATCACCAGAAAAGGTTCAGCATGGATGTGTTAAAGAGTGCCAGGATGCAGATAGACCACTCAAAGCTGAGGTTTATGATGGAGGAAATTGTGACAAAAAATGTTCATCTCATGTTTATTCACAACAGAATAATCATAATTCCTCTATGAAAGAATTCCCAAATCCTAAGATTGATGTCCACTCAGGCATTGCTTCTGTAGCAACAAGTTCAAGTAGTGCAGAAAAGTTTGCTGCTGAGAGATTTGTGGATGGGAAAAGTCATAATAAGATGGAAAATTTAACAAGCAAAGACATATTAGGTTCCTCTGGTCATCCAGAGGGTAGTTGTTGTAAATTAGATAGTGATACAAATAAGCTAAACAATGAGCTGAATAAGCTTGAGAATATGCCAATTGGCCCTAGGACTGAGATGTGCAGTTTTGAGAATCCAATAACTGAAAAACCTCCTGCACTGATCGGTTTAGGTGGGAATGCCAAGTTATGTCAGCTTGGTGACAGGATTCCCAGTAGGTCATTGTCCAAAGGTTGTGACAATGAGCAAGTAGTTAGTAGAGATGATGACGAAAACTATTCTGGTTGTACTCACCCTAGTACCAAAACAAAATCCTTTCGGCCAATGTCTTGTCTAGATGATAGAAGAATAAGGAAACTATTGGCTTGTAAATATCGTAAAGTTGCCAAGGAGCTAAAGGATGATGCACTTTGTAACCGTGATGGAGATTTGAAGCCAACTTATCATAGTAAGAAGAACTGCTATAAACGCCAAAGATCTCAGATTAATCTTCCTTTCAAAAAGAGGAAGCTGTTTAATTTTAGTTCTGTTTCAACTTCAAATGGATTTATCAGAAGTGGTGATATGTGTTATTCACCTGAGAAAGACCCTGGAATGTCACTCTTGAAACGTCAAAACTCCACATTACGATATAGAAGAGGTGCTCATGTGAATATTAGGATCAAATCATTTAGAGTGCCAGAGCTTTTTATTGAGATTCCGGAAACTGCAACAGTTGCATCATTGAAGAGGACAGTAATGGATGCAGTGACTGCTGTACTTGGAGGTGGATTGCGCGTTGGTGTCCTTCTTCAAGGAAAGAAAGTTAGAGATGACAGTAAAACTTTACTTCAAACTGGAATTTCCCATGATAACCATTTGGATGCTTTGGGTTTTACCCTTGAGCCTAAAGGCCTACCACCTGTACATGCTTCACATTCTTTGGATGTTCCTGAAGCAGACATACCTCATCCTCTAATAAGGTATCCTTCCAGTCCAGCAGTAATTCATAGTTCTGACATGTTACCAGAGAATCAACTAACCAGTTTGGGTAGCCTTGTAGAAAGTGACCATGATTCAGCATCTTATCCTATCAATGCATCTGCTGACAAAGGTATAACAGATTCTAAAGTACTGATTACTGTTCCTGAAATTAGTAAGGAAGAACTAGCTGTGGTACCGGTGGCCCAGAAGTCGAAGCGATCTGAGAGTTTGCAGCGCCGAATTCGTAGGCCATTTTCTGTTGATGAAGTGGAAGCACTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGTGATGTTAAACGTCGTGCTTTTGATAATGCAGACCATCGAACATATGTGGATTTGAAGGATAAATGGAAAACTCTGGTGCACACGGCAAGAATATCCCCTCAGAAAAGGAGGGGAGAGCCTGTTCCTCAAGAGCTTCTAGATAGGGTCCTAACTGCACACGCATATTGGTCCCACCACCACCCTGAAAATACTACCCTCCTCTTTAATCAGTCTTTGTCAACACCACCTGGCCTTGTACATGGTGTAACTGCTTAA 2031 0.4111 MVSQKRLVYGFKDYEPPAIPRAARSTRKRAKFQRRVEDDQMGAFDLLAAVAGKLFFQDKENPTMASDTSPEKVQHGCVKECQDADRPLKAEVYDGGNCDKKCSSHVYSQQNNHNSSMKEFPNPKIDVHSGIASVATSSSSAEKFAAERFVDGKSHNKMENLTSKDILGSSGHPEGSCCKLDSDTNKLNNELNKLENMPIGPRTEMCSFENPITEKPPALIGLGGNAKLCQLGDRIPSRSLSKGCDNEQVVSRDDDENYSGCTHPSTKTKSFRPMSCLDDRRIRKLLACKYRKVAKELKDDALCNRDGDLKPTYHSKKNCYKRQRSQINLPFKKRKLFNFSSVSTSNGFIRSGDMCYSPEKDPGMSLLKRQNSTLRYRRGAHVNIRIKSFRVPELFIEIPETATVASLKRTVMDAVTAVLGGGLRVGVLLQGKKVRDDSKTLLQTGISHDNHLDALGFTLEPKGLPPVHASHSLDVPEADIPHPLIRYPSSPAVIHSSDMLPENQLTSLGSLVESDHDSASYPINASADKGITDSKVLITVPEISKEELAVVPVAQKSKRSESLQRRIRRPFSVDEVEALVQAVEKLGTGRWRDVKRRAFDNADHRTYVDLKDKWKTLVHTARISPQKRRGEPVPQELLDRVLTAHAYWSHHHPENTTLLFNQSLSTPPGLVHGVTA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3149 676 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 654 IPR031105 -
Aev04g3149 676 SUPERFAMILY Ubiquitin-like 380 461 IPR029071 -
Aev04g3149 676 SMART sant 567 620 IPR001005 -
Aev04g3149 676 ProSiteProfiles Myb-like domain profile. 563 618 IPR001005 -
Aev04g3149 676 ProSiteProfiles Ubiquitin domain profile. 382 452 IPR000626 GO:0005515
Aev04g3149 676 Gene3D - 556 658 - -
Aev04g3149 676 SUPERFAMILY Homeodomain-like 569 649 IPR009057 -
Aev04g3149 676 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 563 622 IPR017930 -
Aev04g3149 676 Pfam Myb-like DNA-binding domain 568 617 IPR001005 -
Aev04g3149 676 CDD SANT_TRF 569 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3149 Aev-Chr4 31064645 31068625 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev04g3149 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3149 - - gmx:100797436 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3149 04 31064645 31068625 Aev04g3149 04 31064645 31068625 ECH
Aev04g3149 04 31064645 31068625 Aev07g2336 07 24139726 24143131 ECH
Aev06g2795 06 29518792 29523995 Aev04g3149 04 31064645 31068625 ECH
Aev10g1805 10 19889838 19893348 Aev04g3149 04 31064645 31068625 PCT