Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3144 ATGGCTATGGGCAAAAATGTGGTCTACATTGCAACTACTATGATTATGTCAGTAATGTGGATGGGAATTGAAGGTAGAATTCCAGGTGTTTACTCTGGTGGCTCATGGCAAACTGCTCATGCTACCTTCTATGGAGGATCTGATGCTTCCGGCACCATGGGGGGAGCGTGTGGGTATGGGAACTTGTACAGTCAAGGATACGGTGTGAACACGGCGGCATTGAGCACAGCGCTGTTCAACAGTGGGCTAAGTTGTGGTGCCTGCTTTGAGATCAAGTGTGCTAACGACAAGGAGTGGTGCCATTCTGGCAGCCCTTCCATTTTCATTACTGCTACTAACTTCTGCCCTCCAAACTATGCTCTTCCTAACGACAATGGAGGCTGGTGCAACCCTCCTAGGCCTCACTTTGACCTTGCCATGCCCATGTTCCTTAAAATTGCTGAGTATCGTGCCGGAATTGTACCCGTTGCTTTTCGCCGGGTGCCATGCAGGAAACACGGTGGGGTAAGGTTCACAATAAACGGATTCCGCTACTTCAACCTGGTTCTGATAAGCAACGTGGCAGGTGCAGGGGACATCGTGAGGACCTACGTGAAGGGCACAAGAACAGGGTGGATGCCCATGAGCCGCAACTGGGGCCAGAACTGGCAATCCAACGCCGTTTTGGTGGGCCAGGCCCTCTCTTTTAGGGTCACTGCCAGTGACCGCAGAACCTCTACTTCTTGGAACATTGCCCCTCCCAATTGGCAATTTGGTCAAACTTTCACCGGAAAGAATTTCAGGGTCTGA 789 0.512 MAMGKNVVYIATTMIMSVMWMGIEGRIPGVYSGGSWQTAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDKEWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKHGGVRFTINGFRYFNLVLISNVAGAGDIVRTYVKGTRTGWMPMSRNWGQNWQSNAVLVGQALSFRVTASDRRTSTSWNIAPPNWQFGQTFTGKNFRV* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3144 262 SUPERFAMILY Barwin-like endoglucanases 35 186 IPR036908 -
Aev04g3144 262 PANTHER EXPANSIN-A15 7 261 IPR002963 GO:0009664
Aev04g3144 262 SUPERFAMILY PHL pollen allergen 165 257 IPR036749 -
Aev04g3144 262 SMART dpbb_1 71 158 IPR007112 -
Aev04g3144 262 Gene3D - 27 164 IPR036908 -
Aev04g3144 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 54 168 IPR007112 -
Aev04g3144 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 178 257 IPR007117 -
Aev04g3144 262 Gene3D - 168 260 IPR036749 -
Aev04g3144 262 PRINTS Expansin/Lol pI family signature 35 50 IPR007118 GO:0005576
Aev04g3144 262 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Aev04g3144 262 PRINTS Expansin/Lol pI family signature 53 71 IPR007118 GO:0005576
Aev04g3144 262 PRINTS Expansin/Lol pI family signature 151 167 IPR007118 GO:0005576
Aev04g3144 262 PRINTS Expansin/Lol pI family signature 205 219 IPR007118 GO:0005576
Aev04g3144 262 PRINTS Expansin/Lol pI family signature 75 93 IPR007118 GO:0005576
Aev04g3144 262 PANTHER EXPANSIN 7 261 - -
Aev04g3144 262 PRINTS Expansin signature 93 104 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 66 80 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 143 156 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 243 259 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 126 143 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 167 179 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 107 117 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 179 200 IPR002963 GO:0009664
Aev04g3144 262 PRINTS Expansin signature 214 235 IPR002963 GO:0009664
Aev04g3144 262 Pfam Expansin C-terminal domain 169 246 IPR007117 -
Aev04g3144 262 Pfam Lytic transglycolase 71 157 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3144 Aev-Chr4 31030151 31033436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3144 8 262 Expansin Gene Family AT2G39700 81.176 4.74e-160 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3144 - - gmx:100809139 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3144 04 31030151 31033436 Aev04g3144 04 31030151 31033436 ECH
Aev04g3144 04 31030151 31033436 Aev07g2334 07 24106554 24109776 ECH
Aev10g1808 10 19915455 19917429 Aev04g3144 04 31030151 31033436 ECH
Aev06g2799 06 29545473 29550858 Aev04g3144 04 31030151 31033436 ECH
Aev02g1674 02 18434936 18437865 Aev04g3144 04 31030151 31033436 ECH
Aev10g1808 10 19915455 19917429 Aev04g3144 04 31030151 31033436 PCT