Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3135 ATGTTGGGAAGAACTGTTGCTATAAGGAAGCTCCATCCACATAACTTGCAAGGGCCAGCAGAGTTTCACCAAGAGGTTCAAGTTCTAGGTAGTCTCCAGCACCCTCACCTGTTGACTTTGCTCGGTGTTTGCCCTGAAGCCTGGTCACTTGTATATGAGTACTTGCCCAATGGAAATCTCCAAGACTTCCTTCTCCGAAAAAGCAGTTTTTCCCCGGTGACATGGAATATCCGTGCAAGATGGATCGCTGAAATAGCTAGTGCTCTATGCTTTCTTACACTTCTTTCTAAACCTGAAACTATTATCCATGGTGATCTGAAGCCTGAAACTGTACTTCTCGACTCTGAACTTAGTTGCAAGATTTGTGAATTTGGGTTCAGCAGGCTGGTGACAGAGGAGTCTCTCTATCTTCCCAATTTCAGCTTGAGGACTGAGCCGAAAGGTTCTTTCACATATACAGATCCAGAGTTTCAGAGAACCGGAATACTAACACCGAAGTCTGACATGTACTCCTTTGGCCTCATCCTTTTGCAACTTCTGACTGGTAGACCTCCGGTAGGATTAGCTGCCGAAGTACGCAGAGCAGTTTCATCTGGAAGATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCCTTCAGCTGTGGCAACACGATTGGTTGACCTGGGATTGGAATGCTGCCGACAAAATGGTAGGGACAGACCGGAGTTAACACCTAGCCTAGTGAGAGAACTGGAGCAGTTGCATGTTTCAGAAGAGCGGCCCGTGCCATCATTTTACTTGTGTCCAATCCTTCAGGAAATAATGCATGATCCTCAAGTTGCAGCAGACGGATTTACTTACGAAAGGGACGCCATAACCGAATGGTTGGAAAATGGGCACGACACCTCTCCCATGACGAATTTAAAATTGAGTCACCTGTATCTTACTCCCAACCATGCCCTTCGACTTGCCATTCAAGGCTGGCTCTGCAAATCTTAA 984 0.4624 MLGRTVAIRKLHPHNLQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGNLQDFLLRKSSFSPVTWNIRARWIAEIASALCFLTLLSKPETIIHGDLKPETVLLDSELSCKICEFGFSRLVTEESLYLPNFSLRTEPKGSFTYTDPEFQRTGILTPKSDMYSFGLILLQLLTGRPPVGLAAEVRRAVSSGRLSSILDSSAGEWPSAVATRLVDLGLECCRQNGRDRPELTPSLVRELEQLHVSEERPVPSFYLCPILQEIMHDPQVAADGFTYERDAITEWLENGHDTSPMTNLKLSHLYLTPNHALRLAIQGWLCKS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3135 327 Pfam U-box domain 257 326 IPR003613 GO:0004842|GO:0016567
Aev04g3135 327 CDD RING-Ubox_WDSUB1_like 261 302 - -
Aev04g3135 327 Gene3D Transferase(Phosphotransferase) domain 1 56 256 - -
Aev04g3135 327 PANTHER OS02G0152300 PROTEIN 1 326 - -
Aev04g3135 327 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g3135 327 ProSiteProfiles U-box domain profile. 256 327 IPR003613 GO:0004842|GO:0016567
Aev04g3135 327 Gene3D Phosphorylase Kinase; domain 1 2 55 - -
Aev04g3135 327 PANTHER OS10G0100500 PROTEIN 1 326 - -
Aev04g3135 327 SMART Ubox_2 260 323 IPR003613 GO:0004842|GO:0016567
Aev04g3135 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 327 IPR013083 -
Aev04g3135 327 SUPERFAMILY RING/U-box 254 326 - -
Aev04g3135 327 Pfam Protein tyrosine and serine/threonine kinase 5 239 IPR001245 GO:0004672|GO:0006468
Aev04g3135 327 SUPERFAMILY Protein kinase-like (PK-like) 3 244 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3135 Aev-Chr4 30970952 30973112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3135 6 324 U-box Gene Family AT2G45910 49.249 5.05e-104 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aev04g3135 PK_Tyr_Ser-Thr 7.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3135 - - lang:109325761 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3135 04 30970952 30973112 Aev04g3135 04 30970952 30973112 ECH