Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3127 ATGATGGAGGGTGATAAATATGATGATGATAGTGAAGAAGTAGTGGAGATGATGGGAATTGTGGGAGGGTCGTGTAATAATAGTAGTACTAGTGGAGGTGGTGGGAGTTCATCAAGGTGGAACCCAACGAAGGAGCAGATAAGGATGCTGGAGAATCTGTACAAGGAGGGGATTAGGACCCCTACAGCAGAGGAGATTCAGCACATCACAGCGAGGCTCAGAGTGTACGGTCACATCGAGGGCAAGAATGTGTTCTACTGGTTTCAGAATCACAAGGCTCGCCAGAGGCAGAAGCAGAAGCAACATTCCATTGCCTACTTTAATCGATTCCTCAATCATCCTCATCATCCCCTTTTCACCTCCACTCCTCCAAATAATCCTATGTGCGGGCCATATTGCATGGCACAGCAGGGACAGAGTACTGAAATGGGCTTTTACCATCATCATCAACATCCAAAAGTGCTGGTTCCCGTAGGTATTAGTAGAAGGAATAATAATAACCCCAATAATGAAAAAGTTGTTGTACCAATGGGGATGATGCCACCAAGAAGCACCATGTGTACTCCCAATAATGCCCCTGTTGTCTCTGTCCCTGTCCCTGTACCTTTGGTATATGAAGGAGCCATGATACAGCAAATGCAACAACAACAACAACAACAAACTATTATCTCTGATTGTAACAACCTCAGTAACCAAGAAACATTGGATCTTTTCCCTCTGCACCCAACTGGCATCTTAGGAGGAAAACCAACTGAAGACAATAATAATAATAAGGTGGTTCTTGTTGTTTCCCCTGATCATCATCATCAATATGGTTATGGAAACCAAAACCAAAACCAAAAACCCTCCTTTTTTGATTTTTTCACTTCAAGGGCCACTTCAGACTAA 888 0.4347 MMEGDKYDDDSEEVVEMMGIVGGSCNNSSTSGGGGSSSRWNPTKEQIRMLENLYKEGIRTPTAEEIQHITARLRVYGHIEGKNVFYWFQNHKARQRQKQKQHSIAYFNRFLNHPHHPLFTSTPPNNPMCGPYCMAQQGQSTEMGFYHHHQHPKVLVPVGISRRNNNNPNNEKVVVPMGMMPPRSTMCTPNNAPVVSVPVPVPLVYEGAMIQQMQQQQQQQTIISDCNNLSNQETLDLFPLHPTGILGGKPTEDNNNNKVVLVVSPDHHHQYGYGNQNQNQKPSFFDFFTSRATSD* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3127 295 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 25 172 - -
Aev04g3127 295 SMART HOX_1 35 102 IPR001356 GO:0003677
Aev04g3127 295 Pfam Homeodomain 37 97 IPR001356 GO:0003677
Aev04g3127 295 ProSiteProfiles 'Homeobox' domain profile. 33 98 IPR001356 GO:0003677
Aev04g3127 295 Gene3D - 39 105 - -
Aev04g3127 295 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 25 172 IPR044555 GO:0003700|GO:0099402
Aev04g3127 295 SUPERFAMILY Homeodomain-like 33 105 IPR009057 -
Aev04g3127 295 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 208 292 - -
Aev04g3127 295 CDD homeodomain 39 99 IPR001356 GO:0003677
Aev04g3127 295 MobiDBLite consensus disorder prediction 22 41 - -
Aev04g3127 295 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 208 292 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3127 Aev-Chr4 30899287 30900248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3127 32 242 Wox Gene Family AT5G59340 42.922 1.85e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aev04g3127 Homeodomain 8.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3127 - - gmx:100801698 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3127 04 30899287 30900248 Aev04g3127 04 30899287 30900248 ECH