Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3101 ATGGTTCAAGAGGAAATGAGAAAGGGTCCATGGACAGAACAAGAAGACTTGAAACTAGTTTCATTTGTGGGATTATTTGGAGACCGTAGATGGGACTTCATAGCTAAGGTATCAGGTCTGAATCGAACAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTACCTGCACCCTGGCCTCAAACGTGAAAAGATGACACCCCATGAAGAAAGACTCATCATGGAACTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCTAGAAAATTGCCAGGGAGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAAAAGGCACAGGAGAAGAAGAATAAGCATGAACCTGAAAGTACTACTCCAATTTCACCAACTTCTTCTAGTTGCATATCTTCACTCTCCTCCTCTTCCTCCAACAACAACAATAACAACCATGTTGTGGATTCAAATGCTTCCAAAAAATCTGGAGAAGAAAGCTTTTATGACACAGGAGGGCCTAATAGGCTTGTTCCAAGCGGGGCTTTGCTTCCTCTTATGCAATGGGGAGGAAGGACCCATTTTCTGCTTGCTATTGTTAGGAAAATTCATGAGGTCCAGGAGTTACCTTCAGTATTTATCACTTTTTTTGCATGGAGCATTGGTGAGGTAATTAGATATTCACATTATGCTTTCAGTTGCACGGGAAATTGTCCTCCTTGGATTACCTATGTCAGGTACACTGCTTTTATTGTGCTGTATCCCTTGGGAGTGGGTCCTGGTGAAATATGGATCATGTACAAGGCACTATCAATTGTAAAGAAGAAGAACCTCTATGCAGATTCCTTTTCTGGCCTCCCATTTAGTTATTATGATTTTCTTAGGGTTGTACTCATCACTTATCCGTTCCTCTGGCTCAAACTTTACCTGCATTTGTTCAAGCAGCGACGGACAAAGCTCAATAAACGCCACGACAAGAAAAGGGCATGA 978 0.4213 MVQEEMRKGPWTEQEDLKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKREKMTPHEERLIMELHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKNKHEPESTTPISPTSSSCISSLSSSSSNNNNNNHVVDSNASKKSGEESFYDTGGPNRLVPSGALLPLMQWGGRTHFLLAIVRKIHEVQELPSVFITFFAWSIGEVIRYSHYAFSCTGNCPPWITYVRYTAFIVLYPLGVGPGEIWIMYKALSIVKKKNLYADSFSGLPFSYYDFLRVVLITYPFLWLKLYLHLFKQRRTKLNKRHDKKRA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3101 325 Gene3D - 64 107 - -
Aev04g3101 325 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Aev04g3101 325 MobiDBLite consensus disorder prediction 106 121 - -
Aev04g3101 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Aev04g3101 325 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 3 173 - -
Aev04g3101 325 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 173 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev04g3101 325 SMART sant 60 108 IPR001005 -
Aev04g3101 325 SMART sant 7 57 IPR001005 -
Aev04g3101 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Aev04g3101 325 MobiDBLite consensus disorder prediction 106 169 - -
Aev04g3101 325 CDD SANT 63 104 IPR001005 -
Aev04g3101 325 CDD SANT 10 55 IPR001005 -
Aev04g3101 325 Gene3D - 8 60 - -
Aev04g3101 325 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Aev04g3101 325 Pfam Myb-like DNA-binding domain 61 104 IPR001005 -
Aev04g3101 325 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Aev04g3101 325 MobiDBLite consensus disorder prediction 122 161 - -
Aev04g3101 325 Pfam Protein tyrosine phosphatase-like protein, PTPLA 173 318 IPR007482 -
Aev04g3101 325 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3101 Aev-Chr4 30719021 30725492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3101 1 129 MYB Transcription Factor Family AT5G59780 79.845 9.75e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g3101 PTPLA 4.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3101 K10703 - gmx:100527607 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3101 04 30719021 30725492 Aev10g1840 10 20078577 20079599 PCT