Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3096 ATGGCTCCAGCTAAAGTTGATAATTCGAAGAAGAATGATCCAAAGGCACAGGCATTGAAGACTGCGAAGGCAGTGAAATCTGGTGGAGCAACGTTCAAGAAGAAGGCGAAGAAGATCCGAACCACTGTTACGTTCCACAGGCCGAAGACACTGAAGAAGGATAGGAGCCCTAAGTACCCTCGCATCAGTGCCCCTTCGAGGAACAAGCTCGACCATTACCAGATCCTCAAGTTCCCTCTCACCACCGAATCCGCGATGAAGAAGATCGAAGATAACAACACCTTGGTTTTCATCGTTGATTTGCGTGCCGATAAGAAGAAGATCAAGGATGCAGTGAAGAAGATGTATGATATTCAGGCCAAGAAGGTTAACACATTGATCAGGCCCGATGGCTCCAAGAAGGCCTATGTTAGGTTGACACCAGATTACGATGCGTTGGATGTAGCTAACAAGATTGGGATCATCTAA 468 0.4679 MAPAKVDNSKKNDPKAQALKTAKAVKSGGATFKKKAKKIRTTVTFHRPKTLKKDRSPKYPRISAPSRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGSKKAYVRLTPDYDALDVANKIGII* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3096 155 ProSitePatterns Ribosomal protein L23 signature. 133 148 IPR001014 -
Aev04g3096 155 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 155 IPR013025 GO:0003735|GO:0005840|GO:0006412
Aev04g3096 155 Hamap 50S ribosomal protein L23 [rplW]. 75 155 IPR013025 GO:0003735|GO:0005840|GO:0006412
Aev04g3096 155 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 155 - -
Aev04g3096 155 TIGRFAM uL23_arch: ribosomal protein uL23 79 155 IPR019985 GO:0003735|GO:0005840|GO:0006412
Aev04g3096 155 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g3096 155 Pfam Ribosomal protein L23, N-terminal domain 15 66 IPR005633 -
Aev04g3096 155 Gene3D - 36 155 IPR012677 -
Aev04g3096 155 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 72 148 IPR012678 GO:0003735|GO:0005840|GO:0006412
Aev04g3096 155 Pfam Ribosomal protein L23 75 135 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3096 Aev-Chr4 30693118 30694469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3096 1 155 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 86.452 5.45e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3096 K02893 - gmx:100777933 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3096 04 30693118 30694469 Aev04g3096 04 30693118 30694469 ECH
Aev10g1843 10 20099895 20101366 Aev04g3096 04 30693118 30694469 ECH
Aev10g1843 10 20099895 20101366 Aev04g3096 04 30693118 30694469 PCT