Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3077 ATGAATGGAATGCAGCATTATCATGGTCATCAATCAGAGAGTCCAGTGTCAAGTGAAAGTAGTATGATCATAGAAGCAATGAGCAGAGCCAGCCCTTATAGCCCTGAGGAGAAGAAGGTCAGGATTCAGAGATATAGAACCAAGAGAAACCAGAGGAACTTCACCAAGAAGATTAAGTATGCTTGCAGGAAGACACTGGCAGACAGCAGGCCACGTATCAGAGGGAGATTTGCAAGGAATGATGAAATTGTGATGATGATGAACAATAATTCCGAATCAGAAGTAGTTGATCAGTGGAATCAATTTGGTGCTGTTGCAGGAGATGAATTAGAGGAATATGATGAAGATGATGAGAATTGGGCCAATTTCTTTGATTCTTTGGATCCTGCTGTTAAACCCCAAGACAATACTTCCTCTTTCGGTTACTATTAG 432 0.412 MNGMQHYHGHQSESPVSSESSMIIEAMSRASPYSPEEKKVRIQRYRTKRNQRNFTKKIKYACRKTLADSRPRIRGRFARNDEIVMMMNNNSESEVVDQWNQFGAVAGDELEEYDEDDENWANFFDSLDPAVKPQDNTSSFGYY* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3077 143 MobiDBLite consensus disorder prediction 1 40 - -
Aev04g3077 143 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 1 141 IPR045281 GO:0009909
Aev04g3077 143 MobiDBLite consensus disorder prediction 1 27 - -
Aev04g3077 143 PANTHER CCT MOTIF PROTEIN 1 141 - -
Aev04g3077 143 ProSiteProfiles CCT domain profile. 38 80 IPR010402 GO:0005515
Aev04g3077 143 Pfam CCT motif 40 80 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3077 Aev-Chr4 30532267 30534568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3077 29 102 C2C2-CO-like Transcription Factor Family AT5G24930 41.892 3.09e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev04g3077 CCT 7.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3077 - - lang:109352757 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3077 04 30532267 30534568 Aev04g3077 04 30532267 30534568 ECH
Aev10g1859 10 20190021 20191510 Aev04g3077 04 30532267 30534568 PCT