Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3050 ATGGAAACCATACCGTCGATGGATCTGATGCGCTCTGAGAAAATGGCGCTCGTCCAACTCATCATCCCTGCCGAGTCCGCTCACCGAGCCATTACCTATTTGGGCGAACTCGGTCTCCTCCAATTCCGAGACTTAAATGCTGAAAAAAGTCTCTTCCAGAGAATGTTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCAAGAAAGCTTCGATTTTTCAAAGAGCAAATCAATAAAGCTGGTCTAGTATCTTCCCAACCTGTCTTGCAACCAGAAGTTTACTTGGAGGATTTAGAGATGCAACTTGCAGAACATGAACATGAGCTAATTGAAATGAACTCTAATAGTGAGAAACTTCGGCAATCTTATAACGAACTCCTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGATTTTCTAGTTTCAAATCATGGACATTCTGTTTCAGAAGAGAGAGAATTGGAGGAGAATATTTACTCCAATGGAGAATATGTTGAGACACCATTTTTATTTGAACAGGAAACGAGGATAGGACCATCAAACCAATCTGGTTTAAGATTTATTAGTGGGATAATTTGTAAATCCAAAGTTCTTCGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACAAGCTGACCAAATCATGGATCCAATTTCAAATGAGATGGTTGAGAAAATAGTGTTTGTGGTGTTTTTCTCTGGGGAGCAGGCAAGAAAAAAGATTCTGAAAATTTGTGAGGCATTTAGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAGAGGCAAATAACTAGGGAGGTTTCATCACGTCTTGCTGATTTAGAGGCAACTTTAGATGCTGGTCTTAGTCACCGGAATAAGGCTCTAAATTCTGTGGGAAGTCATTTGGAAAAATGGATGGAGATGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGCTGAATTTTGACGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATTTTTGCAAAAACACAGATTCATGAGGCACTGCAACGTGCAACTTTTGACAGCAACTCACAAGTTGGCATAATCTTTCATTCAATGGATGCACGGGAATCACCCCCTACATATTTTAGGACCAATAGTTTTACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAACCCTGCAGTATACACAACTATTATATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGATTGGAGCATTAGTCCTCATAGCACGTGAAAGAAAGCTCAGCACTCAGAGACTTGGAAGCTTTATGGAGATGCTTTTTGGCGGGCGATACGTGCTCCTTTTGATGTCATTATTTTCAATTTATTGTGGGCTAATCTACAATGAATTTTTTTCTGTTCCTTTTCACATATTTGGTTCGTCAGCTTACAAGTGCCGAGATGGCTCATGCAGCGATGCACATACTATTGGCTTAGTCAAATATCGAGAACCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGATCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCCATTCTGCTTGGTGTGGTACATATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCACTTCTTTGGAAACTCACTAGATATAAGGTACCAGTTTGTACCACAGGTGATTTTCCTTAACAGTCTTTTTGGGTATCTTTCCCTTCTCATTGTTGTAAAGTGGTGTACCGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCCTTTGACAATCTTGGTGAGAATGAGTTGTTCTGGGGCCAACGGACACTTCAAGTCGTGTTATTGCTTTTGGCTTTGATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAACTTCATAATGAGAGGTTTCAAGGGCAAACTTATGGCATGCTTAATACTGGTGATATGATGGACCTTGAGGTGGAACCAGATTCAGCCAGGGAACATCATGAGGAATTCAATTTCAGCGAGGTCTTTGTCCATCAAATGATTCACGCCATTGAGTTTGTTCTTGGTTCAGTTTCAAATACGGCATCTTATCTTCGACTTTGGGCATTAAGCTTGGCTCATTCAGAACTTTCTACTGTCTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTACGACAATCTAATCATACGATTAGTGGGGCTAATTGTTTTTGCCTTTGCTACTGCATTTATACTACTAATGATGGAGACTCTGAGTGCTTTTCTTCATGCCCTTCGACTTCATTGGGTAGAATTTCAAAATAAATTCTATCATGGTGATGGCTACAAGTTCAGACCTTTTTCCTTTGCCTCCTTAACAGAGGATGAATGA 2442 0.4029 METIPSMDLMRSEKMALVQLIIPAESAHRAITYLGELGLLQFRDLNAEKSLFQRMFVNQVKRCAEMSRKLRFFKEQINKAGLVSSQPVLQPEVYLEDLEMQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACDFLVSNHGHSVSEERELEENIYSNGEYVETPFLFEQETRIGPSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAQADQIMDPISNEMVEKIVFVVFFSGEQARKKILKICEAFSANCYPVPEDISKQRQITREVSSRLADLEATLDAGLSHRNKALNSVGSHLEKWMEMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIHEALQRATFDSNSQVGIIFHSMDARESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLIGALVLIARERKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGSSAYKCRDGSCSDAHTIGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVVHMNLGIILSYFNAHFFGNSLDIRYQFVPQVIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFDNLGENELFWGQRTLQVVLLLLALIAVPWMLFPKPFILKKLHNERFQGQTYGMLNTGDMMDLEVEPDSAREHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLIVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDE* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3050 813 Pfam V-type ATPase 116kDa subunit family 33 806 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aev04g3050 813 PANTHER VACUOLAR PROTON ATPASE A1 4 813 - -
Aev04g3050 813 Coils Coil 95 122 - -
Aev04g3050 813 PANTHER VACUOLAR PROTON ATPASES 4 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aev04g3050 813 PIRSF ATP6V0A1 5 813 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3050 Aev-Chr4 30241421 30249225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3050 1 807 Primary Pumps ATPases(2) AT2G28520 79.187 0.0 1320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3050 K02154 - gmx:100800799 1468.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1876 10 20317286 20324628 Aev04g3050 04 30241421 30249225 PCT