LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3050	ATGGAAACCATACCGTCGATGGATCTGATGCGCTCTGAGAAAATGGCGCTCGTCCAACTCATCATCCCTGCCGAGTCCGCTCACCGAGCCATTACCTATTTGGGCGAACTCGGTCTCCTCCAATTCCGAGACTTAAATGCTGAAAAAAGTCTCTTCCAGAGAATGTTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCAAGAAAGCTTCGATTTTTCAAAGAGCAAATCAATAAAGCTGGTCTAGTATCTTCCCAACCTGTCTTGCAACCAGAAGTTTACTTGGAGGATTTAGAGATGCAACTTGCAGAACATGAACATGAGCTAATTGAAATGAACTCTAATAGTGAGAAACTTCGGCAATCTTATAACGAACTCCTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGATTTTCTAGTTTCAAATCATGGACATTCTGTTTCAGAAGAGAGAGAATTGGAGGAGAATATTTACTCCAATGGAGAATATGTTGAGACACCATTTTTATTTGAACAGGAAACGAGGATAGGACCATCAAACCAATCTGGTTTAAGATTTATTAGTGGGATAATTTGTAAATCCAAAGTTCTTCGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACAAGCTGACCAAATCATGGATCCAATTTCAAATGAGATGGTTGAGAAAATAGTGTTTGTGGTGTTTTTCTCTGGGGAGCAGGCAAGAAAAAAGATTCTGAAAATTTGTGAGGCATTTAGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAGAGGCAAATAACTAGGGAGGTTTCATCACGTCTTGCTGATTTAGAGGCAACTTTAGATGCTGGTCTTAGTCACCGGAATAAGGCTCTAAATTCTGTGGGAAGTCATTTGGAAAAATGGATGGAGATGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGCTGAATTTTGACGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATTTTTGCAAAAACACAGATTCATGAGGCACTGCAACGTGCAACTTTTGACAGCAACTCACAAGTTGGCATAATCTTTCATTCAATGGATGCACGGGAATCACCCCCTACATATTTTAGGACCAATAGTTTTACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAACCCTGCAGTATACACAACTATTATATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGATTGGAGCATTAGTCCTCATAGCACGTGAAAGAAAGCTCAGCACTCAGAGACTTGGAAGCTTTATGGAGATGCTTTTTGGCGGGCGATACGTGCTCCTTTTGATGTCATTATTTTCAATTTATTGTGGGCTAATCTACAATGAATTTTTTTCTGTTCCTTTTCACATATTTGGTTCGTCAGCTTACAAGTGCCGAGATGGCTCATGCAGCGATGCACATACTATTGGCTTAGTCAAATATCGAGAACCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGATCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCCATTCTGCTTGGTGTGGTACATATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCACTTCTTTGGAAACTCACTAGATATAAGGTACCAGTTTGTACCACAGGTGATTTTCCTTAACAGTCTTTTTGGGTATCTTTCCCTTCTCATTGTTGTAAAGTGGTGTACCGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCCTTTGACAATCTTGGTGAGAATGAGTTGTTCTGGGGCCAACGGACACTTCAAGTCGTGTTATTGCTTTTGGCTTTGATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAACTTCATAATGAGAGGTTTCAAGGGCAAACTTATGGCATGCTTAATACTGGTGATATGATGGACCTTGAGGTGGAACCAGATTCAGCCAGGGAACATCATGAGGAATTCAATTTCAGCGAGGTCTTTGTCCATCAAATGATTCACGCCATTGAGTTTGTTCTTGGTTCAGTTTCAAATACGGCATCTTATCTTCGACTTTGGGCATTAAGCTTGGCTCATTCAGAACTTTCTACTGTCTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTACGACAATCTAATCATACGATTAGTGGGGCTAATTGTTTTTGCCTTTGCTACTGCATTTATACTACTAATGATGGAGACTCTGAGTGCTTTTCTTCATGCCCTTCGACTTCATTGGGTAGAATTTCAAAATAAATTCTATCATGGTGATGGCTACAAGTTCAGACCTTTTTCCTTTGCCTCCTTAACAGAGGATGAATGA	2442	0.4029	METIPSMDLMRSEKMALVQLIIPAESAHRAITYLGELGLLQFRDLNAEKSLFQRMFVNQVKRCAEMSRKLRFFKEQINKAGLVSSQPVLQPEVYLEDLEMQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACDFLVSNHGHSVSEERELEENIYSNGEYVETPFLFEQETRIGPSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAQADQIMDPISNEMVEKIVFVVFFSGEQARKKILKICEAFSANCYPVPEDISKQRQITREVSSRLADLEATLDAGLSHRNKALNSVGSHLEKWMEMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIHEALQRATFDSNSQVGIIFHSMDARESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLIGALVLIARERKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGSSAYKCRDGSCSDAHTIGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVVHMNLGIILSYFNAHFFGNSLDIRYQFVPQVIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFDNLGENELFWGQRTLQVVLLLLALIAVPWMLFPKPFILKKLHNERFQGQTYGMLNTGDMMDLEVEPDSAREHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLIVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDE*	814

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3050	813	Pfam	V-type ATPase 116kDa subunit family	33	806	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Aev04g3050	813	PANTHER	VACUOLAR PROTON ATPASE A1	4	813	-	-
	Aev04g3050	813	Coils	Coil	95	122	-	-
	Aev04g3050	813	PANTHER	VACUOLAR PROTON ATPASES	4	813	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Aev04g3050	813	PIRSF	ATP6V0A1	5	813	IPR026028	GO:0000220\|GO:0046961

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g3050	Aev-Chr4	30241421	30249225	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g3050	1	807	Primary Pumps ATPases(2)	AT2G28520	79.187	0.0	1320

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3050	K02154		-	gmx:100800799	1468.75

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev10g1876	10	20317286	20324628	Aev04g3050	04	30241421	30249225	PCT

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