Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3044 ATGGAGGGTAGTGATGCAAACAACTCAACTTGCTCTGCCCCTATAATGGTTAATTATTCTAACCAATCTTCTTCTCCTACATCATCATCCTCTCCTCCTCCTGCTCAAGTTGTGATGAGTCCTTGTGCTGCTTGCAAGATCTTGAGAAGAAGATGTGCTGAGAAATGTGTGTTGGCACCGTATTTTCCTCCTACTGAACCTGCCAAATTTACCATTGCTCACAGAGTCTTTGGTGCTAGCAACATCAGCAAGTTCTTGCAGGAACTTCCAGAATGTCAAAGAGCAGATGCAGTGACAAGCATGGTATATGAGGCAAGTGCAAGAATAAGAGACCCTGTTTATGGATGTGCAGGGTCAATTTGCCAGCTCCAAAAACAGGTCAATGAGCTTCAAGCACAATTAGCCAAAGCACAAGCTGATCTTGTAAACTTGCAACTCCAACAAGCCAATCTTGTTGCTCTAATTTGCATGGAAATGACTCAAACCCCAATTCATCAATCACCACAACAATCAATGGACAACAATAACAATTTCATGATTAGTTCTAGTAGTCCTCCACATAGTATGACCTTCTTTGAGGACAACACTAGCCTCAACTCACTATGGGAGCCTCTTTGGACATGA 624 0.4263 MEGSDANNSTCSAPIMVNYSNQSSSPTSSSSPPPAQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNISKFLQELPECQRADAVTSMVYEASARIRDPVYGCAGSICQLQKQVNELQAQLAKAQADLVNLQLQQANLVALICMEMTQTPIHQSPQQSMDNNNNFMISSSSPPHSMTFFEDNTSLNSLWEPLWT* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3044 207 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 22 204 - -
Aev04g3044 207 Coils Coil 120 147 - -
Aev04g3044 207 Pfam Lateral organ boundaries (LOB) domain 41 138 IPR004883 -
Aev04g3044 207 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 22 204 - -
Aev04g3044 207 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3044 Aev-Chr4 30170392 30172405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3044 37 207 AS2 family AT2G28500 62.637 3.14e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev04g3044 LOB 2.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3044 - - gmx:100789504 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3044 04 30170392 30172405 Aev04g3044 04 30170392 30172405 ECH
Aev10g1882 10 20359524 20361438 Aev04g3044 04 30170392 30172405 ECH
Aev10g1882 10 20359524 20361438 Aev04g3044 04 30170392 30172405 PCT