Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3035 ATGGATTTGGTTTCCAGTTGCAAGGAAAAGTTGGCATATTTTCGAATAAAAGAGCTCAAAGATGTGCTCACTCAGTTGGGCCTTTCGAAGCAGGGAAAGAAGCAGGATCTTGTTGACAGGATATTAACTGTCCTTTCAGATGATCAAGTTTCCAAAATGTGGTCTAAGAAGAGTTCTATTGGAAAAGAACATGTGGCAAAATTAGTGGATGACACATACAGAAAAATGCAGATATCTGGGGCTACTGATCTTGCATCAAAGGGTCAGGGTGCCTCAGATAGCAGTAATGTGAAAATTAAAGGTGAAAAAGATGATTCATTTCAATCAGATGCAAAAATTCGCTGTCTTTGTGGTAATACATTGGAAACAGATGCATTGGTCAAGTGTGATGATCCAAGATGCCATGTGTGGCAACACCTCAGTTGTGTTATTATTCCTGAGAAACCAATGGAAAGCGTGTTGCCAGTTCCTGAAAAATTCTATTGTGAAATCTGTAGACTCAGTCGTGCAGATCCGTTTTGGCTTGCAGTGGCACACCCTTTAATGCCTGTGAAGTTGATCATAACCAGTCATCCAACTGATGGATCCAACCCAGTGCAGAGTGTGGAGAAAAGTTTTCAACTTACAAGAGCAGACAAGGACTTGGTGTCAAAACCGGAATTCGATGTTCAGGCTTGGTGTATGCTTTTGAATGACAAGGTCCCATTCAGGATGCAGTGGCCACAGTATACAGATCTACAGATCAATGGTGTTCCTGTTCGTGCGATTAACAGACCTGGTTCACAACTGCTTGGGGCCAATGGCCGTGATGATGGTCCAATTATCACGCCATATACAAAAGACGGAATTAATAAGATTTCCTTAACAGGATGTGATGCTCGCATTTTCTGTTTAGGGGTTCGTATTGTTAGAAGGCGCAACATGCAACAGATCCTAAACTTAATCCCAAAGGAATCTGAAGGTGAACCTTTTGATGATGCTCTTGCACGTGTCTGTCGTTGTGTTGGAGGAGGAAATGCAGATGATAATGCTGATAGTGACAGCGATTTGGAAGTGGTTTCAGATACTTTTAGCATTAACCTTCGTTGTCCAATGAGTGGTTCAAGGATGAAGATTGCAGGAAGATTTAAACCTTGTATTCACATGGGATGTTTTGATCTTGAAGTTTTTGTTGAAATGAATCAGCGGTCAAGGAAGTGGCAATGCCCCATATGTCTCAAAAACTATGCATTGGAGAATATCATCATTGACCCTTATTTCAACCGCATCACTTCTATGATGACGAACTGTGGTGAAGAGGTTGCAGAGGTTGAGGTGAAGCCTGATGGTTCCTGGCGTGTTAAAACCAAGAGTGAAAGTGAACGTTTGGATTTAGGGAATCTTGCACAGTGGCACTTACCTGATGGGTCCCTCTGTGTTTCTAGTGATGGAGAAGCCAGAAGAATGGAAACTTTGAAGCTCGTTAAACAGGAAGGTGTTTCAGACAGTCCTACTGGTTTAAAACTAGGCATCAGGAAGAATCGCAATGGAGTTTGGGAAGTCAGCAAGCCGGAGGATACAAACACCTCTTCTGGTAATAGATTGAAAGAGGTGTTTGGAAATCATGAACATGAGGTTATTCCAATGAGCAGTGGCAGCTCTGAAAGTGGCCGTGATGGTGATGATCCTAGCGTAAATCAGGGTGGTGGTGGGCATATTGATTATTCTACTGCAAATGGGAATGAGATGGATTCTCCTTGTGTTAATAATGTTGATCTAGGGTATGGATATGCCGCTGCACACAATACTTCTGCTCAGGCAGGTGGTGCAGAAGTTATTGTTCTTAGTGATTCTGATGACGACGATGACATATTGGTATCATCTGCAATTGCGTATAAGAACGACCAAACTGATGCCGCAGGAGATGGCTACTCGGTGCCGCCATCTGGAATTGTTGATTCTTATGCTGAAGAGCACAACAATCTTGGTGGTAATTCGTGTTTGGGACTTTTTCCTAATGATGATGATTTTGGTCTGTGGTCATTGCCGACTGGAACTCAGGCTGGTCCAGGGTTCCAATTATTTGGTTCTGATGCAGATGTGTCGGATGCGTTGGTCCATTTGCAGCATGTTCCACCTATGAATTGCCCCTCCTCATCAATGAATGGTTATGCATTGGCTCCAGATACTGCTTTGGGATCTAGTAGTCTCATGCCAGATTCCACAGCTGTTCGATCTGATGCTGATTTAAATGTCGGTTTGGTTGACAATCCATTGGCATTTGCGGGAGATGACCCCTCACTTCAGATTTTCCTCCCCACTAGACCAGGAGAATCATCAGTGCAGCATGAATTGAGAAATCAGGCGAACGTGTCTAATGGAGTCTGCACTGAGGATTGGATATCTCTTAGTCTTGGAGGTGGTACCGCTGCCAGTAATGGTGATGCTTCTACTCAAAATGGTTTGAATTCTGGACTTCAAATCCCTCCCAGAGAAGGTTCCACAAATAACAATTTGGATGATGCTGCATCTTTGCTTCTTGGTATGAATGATGCTAGATCTGACAAGGTGAGTAGGCAAAGATCAGGGAGCCCATTTACATTTCCGCGCCAAAAGCGATCCGTACGGCCTCGCTTGTACCTTTCGATCGAGTCAGATTCGGATTAA 2646 0.4346 MDLVSSCKEKLAYFRIKELKDVLTQLGLSKQGKKQDLVDRILTVLSDDQVSKMWSKKSSIGKEHVAKLVDDTYRKMQISGATDLASKGQGASDSSNVKIKGEKDDSFQSDAKIRCLCGNTLETDALVKCDDPRCHVWQHLSCVIIPEKPMESVLPVPEKFYCEICRLSRADPFWLAVAHPLMPVKLIITSHPTDGSNPVQSVEKSFQLTRADKDLVSKPEFDVQAWCMLLNDKVPFRMQWPQYTDLQINGVPVRAINRPGSQLLGANGRDDGPIITPYTKDGINKISLTGCDARIFCLGVRIVRRRNMQQILNLIPKESEGEPFDDALARVCRCVGGGNADDNADSDSDLEVVSDTFSINLRCPMSGSRMKIAGRFKPCIHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMTNCGEEVAEVEVKPDGSWRVKTKSESERLDLGNLAQWHLPDGSLCVSSDGEARRMETLKLVKQEGVSDSPTGLKLGIRKNRNGVWEVSKPEDTNTSSGNRLKEVFGNHEHEVIPMSSGSSESGRDGDDPSVNQGGGGHIDYSTANGNEMDSPCVNNVDLGYGYAAAHNTSAQAGGAEVIVLSDSDDDDDILVSSAIAYKNDQTDAAGDGYSVPPSGIVDSYAEEHNNLGGNSCLGLFPNDDDFGLWSLPTGTQAGPGFQLFGSDADVSDALVHLQHVPPMNCPSSSMNGYALAPDTALGSSSLMPDSTAVRSDADLNVGLVDNPLAFAGDDPSLQIFLPTRPGESSVQHELRNQANVSNGVCTEDWISLSLGGGTAASNGDASTQNGLNSGLQIPPREGSTNNNLDDAASLLLGMNDARSDKVSRQRSGSPFTFPRQKRSVRPRLYLSIESDSD* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3035 881 CDD PHD_Bye1p_SIZ1_like 114 165 - -
Aev04g3035 881 SUPERFAMILY SAP domain 1 63 IPR036361 -
Aev04g3035 881 ProSitePatterns Zinc finger PHD-type signature. 115 165 IPR019786 -
Aev04g3035 881 MobiDBLite consensus disorder prediction 512 571 - -
Aev04g3035 881 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 171 IPR013083 -
Aev04g3035 881 SMART sap_9 11 45 IPR003034 -
Aev04g3035 881 SMART PHD_3 114 166 IPR001965 -
Aev04g3035 881 SUPERFAMILY FYVE/PHD zinc finger 105 169 IPR011011 -
Aev04g3035 881 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 809 - -
Aev04g3035 881 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 447 IPR013083 -
Aev04g3035 881 MobiDBLite consensus disorder prediction 802 833 - -
Aev04g3035 881 Pfam MIZ/SP-RING zinc finger 359 407 IPR004181 GO:0008270
Aev04g3035 881 ProSiteProfiles Zinc finger SP-RING-type profile. 346 429 IPR004181 GO:0008270
Aev04g3035 881 Pfam SAP domain 14 42 IPR003034 -
Aev04g3035 881 Gene3D SAP domain 1 62 IPR036361 -
Aev04g3035 881 MobiDBLite consensus disorder prediction 514 529 - -
Aev04g3035 881 MobiDBLite consensus disorder prediction 540 554 - -
Aev04g3035 881 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 9 809 - -
Aev04g3035 881 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3035 Aev-Chr4 30093311 30104423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3035 - - aprc:113857557 1454.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3035 04 30093311 30104423 Aev04g3035 04 30093311 30104423 ECH
Aev10g1889 10 20424385 20432015 Aev04g3035 04 30093311 30104423 PCT