Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3032 ATGGAAATTGATCTGAACCATGCAGTGGCAGAGGATGAGAAGAATGCACTATGCATCAATGAGGAATGTGATGAGAAAGGTGCTTGTGTTTGTTCTGTTTCCTCTTCTACTACAACAACAACAATAACATGTTCACCTTCAAGTGCCTCTTCTTCAGCAAATTGTGTTTCTTCTTCTTACCTTGAGCTTTGGCATGCTTGTGCTGGCCCTCTAACATCACTTCCAAAGAAAGGGAATGTTGTGGTCTATTTTCCACAAGGACACTTGGAACAAGTTTCCTCTTTCTCTCCTTTCACACCAATGGAGATTCCAACCTATGATCTTAAGCCACAGATCTTTTGCAGGGTTGTTAATGTCCAGTTACTTGCCAATAAGGAGAATGATGAGGTTTATACACAAGTTACTTTGCTCCCCCAAGCTGAGTTGGGAGATATGAATTTGGAGGGCAAAGAGATTGAAGAGTTGGGAACAAATGAGGGAGGAAATGGAGGGTTACCTATAAAATCAACACCCCACATGTTCTGCAAAACTCTTACTGCCTCTGACACCAGTACTCATGGAGGGTTCTCTGTCCCTCGAAGAGCTGCTGAAGACTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGGCCATCTCAGGAGCTTGTAGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGTCATATTTATAGAGGTCAGCCAAGGAGGCATCTACTCACTACTGGCTGGAGCATTTTTGTAGGCCAAAAGAAGCTTGTTTCTGGTGATGCAGTGCTCTTTCTAAGGGGTGAAAATGGAGAACTGAGATTGGGAATCAGAAGAGCTATTAGACCAAGAAATGGTCTTCCAGAATCAATAGTTGGAAACAAGAACTGTTATCCCAGTTTCCTTTCTTCTGTGGCCAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCCAGTCATGCAGACTTTGTTATACCATACCAAAAATATGTTCAAAGCATCAATAATCAAGTGACAATAGGAACAAGATTCAAAATGAGATTTGAAATGGATGAATCTCCAGATAGAAGGTGTAGTGGTATGGTGATTGGAACAAGTGATTTGGATCCTTATAGATGGCCAAAATCAAAATGGAGGTGCTTGATGGTCAGATGGGATGAGGATATTGAGAGCAATCATCAAGACAGAGTATCTCCATGGGAGATTGACCCTTCTGCTTCTCTCCCTCCATTAAGCATTCAGTCTTCCCCAAGACTGAAGAAACTAAGGACAGATAGGCAACTTGCCTCACACAGCCACCTCATCACTGGAGGCAGTGGATTGATGGACTTTGATGAGTCTGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATGCTGGTTTTGTGTCACTCTATTATGGACATGACACAGTAACAAGCAGGACAGGTTTTGAGATGAGCTCTCCGACTCATCTGAATCTCGCATTGAATGGAGCAAGAAACGTTACCCCTTCTGAGCTTATGGGTGTTCACCCTTTTAGTTATGCAGGCTTCAGTGAAACTACAAATAGGTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTCCATTGAAATCCATAAAGGGAAAGGTTGATTTTAGCAATGGTGCTTGGAGCAAAGCCAATGTAGGTTGCACAAGTTTCAACCTTCATCAAGCAACCAAACCCAACAATAACTTTCAGTCTTTAGGACAAGGAGTTCTTCAATCTCCATATTTTCCTTATGGGGATATTCACAAATCTGGTCAAGCTAGCATGTTTTGCTCAAAACCCATCAATTTCCAAACAGGGAATGTTAATGTATCATTTAACAACACACCTACTACTCAGGCAATGATCAAAAGAAATGAGGTTGGGAAATCAAATGTCCCAAATGAGCATAATATGATGGAAAAAACTTCTGATGCTGCTTCATTAGGTGCAGATATGAGGGTTCCAAATGACAACAACAACAACAATGTTGATAAGGTGAAGGTAAACAATGCCTGCAAACTATTTGGTTTTCCTTTGTCTGAGGAAACTACCACCCAAAATTTACAGAACCCTGCTAAAAGGAGTTGCAGAAAGGTTCACAAGCAAGGCAGCTTAGTAGGAAGAGCCATTGATCTGTCAAGATTGAGCTGCTACAATGACCTGCTGAGTGAACTAGAGATACTGTTTGGCATGGAAGGCCTTCTTAAAGATCCTGATAAGGGATGGAGGGTCCTATACACTGACAGTGAGAATGACATAATGGTTGTGGGAGATGACCCTTGGCATGAGTTCTGCAATGTGGTGTCCAAGATCCATTTATATACCAAAGAAGAAGTGGAGAAGATGACAATTGGGATAACCAGTGATGATACCAATAGCTCTCTAGAACAAGCACCACTCATTATGGAGGCTTCGAAGTCTTCCTCAGTGGGTCAGCCAGTCTATTCTCCAACAGTTGTTAGAGTCTAA 2463 0.419 MEIDLNHAVAEDEKNALCINEECDEKGACVCSVSSSTTTTTITCSPSSASSSANCVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVSSFSPFTPMEIPTYDLKPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELGDMNLEGKEIEELGTNEGGNGGLPIKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVGQKKLVSGDAVLFLRGENGELRLGIRRAIRPRNGLPESIVGNKNCYPSFLSSVANAISTKSMFHVFYSPRASHADFVIPYQKYVQSINNQVTIGTRFKMRFEMDESPDRRCSGMVIGTSDLDPYRWPKSKWRCLMVRWDEDIESNHQDRVSPWEIDPSASLPPLSIQSSPRLKKLRTDRQLASHSHLITGGSGLMDFDESVRSPKVLQGQENAGFVSLYYGHDTVTSRTGFEMSSPTHLNLALNGARNVTPSELMGVHPFSYAGFSETTNRFPRVLQGQEICPLKSIKGKVDFSNGAWSKANVGCTSFNLHQATKPNNNFQSLGQGVLQSPYFPYGDIHKSGQASMFCSKPINFQTGNVNVSFNNTPTTQAMIKRNEVGKSNVPNEHNMMEKTSDAASLGADMRVPNDNNNNNVDKVKVNNACKLFGFPLSEETTTQNLQNPAKRSCRKVHKQGSLVGRAIDLSRLSCYNDLLSELEILFGMEGLLKDPDKGWRVLYTDSENDIMVVGDDPWHEFCNVVSKIHLYTKEEVEKMTIGITSDDTNSSLEQAPLIMEASKSSSVGQPVYSPTVVRV* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3032 820 Gene3D - 172 276 IPR015300 -
Aev04g3032 820 Pfam B3 DNA binding domain 174 275 IPR003340 GO:0003677
Aev04g3032 820 Pfam Auxin response factor 300 381 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev04g3032 820 Gene3D - 337 409 - -
Aev04g3032 820 SMART B3_2 174 276 IPR003340 GO:0003677
Aev04g3032 820 Gene3D - 688 781 - -
Aev04g3032 820 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 808 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev04g3032 820 SUPERFAMILY DNA-binding pseudobarrel domain 166 284 IPR015300 -
Aev04g3032 820 SUPERFAMILY CAD & PB1 domains 696 770 - -
Aev04g3032 820 PANTHER AUXIN RESPONSE FACTOR 26 808 - -
Aev04g3032 820 ProSiteProfiles PB1 domain profile. 692 774 IPR000270 GO:0005515
Aev04g3032 820 ProSiteProfiles B3 DNA-binding domain profile. 174 276 IPR003340 GO:0003677
Aev04g3032 820 CDD B3_DNA 172 274 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3032 Aev-Chr4 30062734 30069133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3032 56 820 B3 DNA Binding Superfamily AT5G60450 59.533 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev04g3032 B3 8.9e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3032 - - lang:109351638 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3032 04 30062734 30069133 Aev04g3032 04 30062734 30069133 ECH
Aev10g1890 10 20433685 20438169 Aev04g3032 04 30062734 30069133 PCT