Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3029 ATGTTGGGAGAGAAAAGTGGTCCAGCTGACTCTATGGCTATGGCTGACTACATCTCAGAGCAGCCCTTCTCATCAAAAAACAATATGATGTCTGAAGAAGCCTCCAACACCATTAGAAGCAACTTAGTTCATGTCCAAGACCCAACCTCAAACCCTAATAATAATAGTAATCACCATCTTCCTGCTAACCCTAATTCAAACCAACCTACCAAGAAAAGGAGGAATCTACCCGGAACACCAGATCCAGATGCAGAAGTGATAGCTCTATCACCAAAGTCTCTAATGGCAACAAACAGATTCGTGTGCGAAATCTGCAAGAAAGGGTTCCAGAGAGACCAGAACTTGCAGCTGCATAGGAGAGGACACAACCTGCCATGGAAGCTGAAGCAGAGGAGCAACAAGGAACAAGTGAGGAAGAAGGTTTATGTGTGCCCTGAGAAGAGTTGTGTCCACCATGACCCTTGTAGAGCACTTGGGGACTTGACTGGTATCAAGAAACACTTCAGCAGGAAGCATGGTGAGAAGAAGTGGAAGTGTGATAAGTGCTCTAAGAAATATGCTGTTCATTCCGATTGGAAGGCACATACCAAGATTTGTGGCACTAGGGAGTATAAATGTGATTGTGGCACTGTTTTTTCAAGGAAGGACAGCTTTATAACACACAGAGCATTTTGTGACGCATTGGCCGAAGAAAGTGGAAGAATAACAACTACAGTTCCAACAGCTTTAAGCAACTTGATGATGATGAGAAGGGACAACAATACTAATCATTTGATGACACAAAGAATAATGCCTCATCATCATCAAATTCTTCCTGGGTTTCATTCTTCATCACAAGTACTACAATTTGGTGGTTCTTCTTCTTCTTCAGCTGTAGCAGCAGGGTCATCAGAAACAATGAGGCTTCCAATATGGCTAGACCATCATCATCATCAACTTGGCTTCTCATCAAACAAATTATTATCATCATCATCAATTGGTGGTGGTGGTAATTTCCCAAATTCTACTACCTCATCATGCATAATGCCTGATGAGCTAGTCCAAACAATGAACATGTTTGGGTCATCTTCGTCATCATCATCATATCCACCGCCAGAAGCAGTAACATTATCATCGCCATTCACAAACAATGCGAATGGCAACAACAACAATAATAATAATATCGGTATGCTACCGCAATTACATGGAGCAATATTGAAGCAAGAACAAGAACAAGAGAACAACAAAGGAGGAGAGTTGTTGTCGTCGTCGTATAATTTCGGTGCTCACAACAACAACACACAACTAGTAGTTGGAGGAAGAAACATGATTAGTCACAACATTATGTCAGCAACTTCACTGTTGCAAAAAGCAACCCAAATAGGATCTACAAGGATCAATGATGATAGCAATCATCATCATAGTGCTTTTGGCTTGGTGGGCTCGAATCTCGTCCTCTCAGGCAATATATCAAACACAAGGAATGCAAACAACAATATTGGAGGAGAATTGTTAATTCCAAAATTGAAGGATAAGGATGAGGATGATGAATTGGGTTTGACTAGGGATTTTCTTGGTGTTGGGGATGAGACAATGAACAACAGGGCATTCTTGCAGATTGATGATGAGTTTGGTGCAATAGGGTCAGACATGGACTTGCAGAGTCAGTATAGTAGTGGTGCTGGACATTACTGCTAG 1677 0.4162 MLGEKSGPADSMAMADYISEQPFSSKNNMMSEEASNTIRSNLVHVQDPTSNPNNNSNHHLPANPNSNQPTKKRRNLPGTPDPDAEVIALSPKSLMATNRFVCEICKKGFQRDQNLQLHRRGHNLPWKLKQRSNKEQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVHSDWKAHTKICGTREYKCDCGTVFSRKDSFITHRAFCDALAEESGRITTTVPTALSNLMMMRRDNNTNHLMTQRIMPHHHQILPGFHSSSQVLQFGGSSSSSAVAAGSSETMRLPIWLDHHHHQLGFSSNKLLSSSSIGGGGNFPNSTTSSCIMPDELVQTMNMFGSSSSSSSYPPPEAVTLSSPFTNNANGNNNNNNNIGMLPQLHGAILKQEQEQENNKGGELLSSSYNFGAHNNNTQLVVGGRNMISHNIMSATSLLQKATQIGSTRINDDSNHHHSAFGLVGSNLVLSGNISNTRNANNNIGGELLIPKLKDKDEDDELGLTRDFLGVGDETMNNRAFLQIDDEFGAIGSDMDLQSQYSSGAGHYC* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3029 558 Gene3D Classic Zinc Finger 79 152 - -
Aev04g3029 558 Gene3D Classic Zinc Finger 156 233 - -
Aev04g3029 558 MobiDBLite consensus disorder prediction 1 85 - -
Aev04g3029 558 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Aev04g3029 558 Pfam Zinc finger, C2H2 type 100 122 IPR013087 -
Aev04g3029 558 MobiDBLite consensus disorder prediction 18 74 - -
Aev04g3029 558 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 52 527 - -
Aev04g3029 558 PANTHER PROTEIN INDETERMINATE-DOMAIN 13-RELATED 52 527 - -
Aev04g3029 558 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 122 IPR013087 -
Aev04g3029 558 SMART c2h2final6 177 197 IPR013087 -
Aev04g3029 558 SMART c2h2final6 100 122 IPR013087 -
Aev04g3029 558 SMART c2h2final6 142 172 IPR013087 -
Aev04g3029 558 SUPERFAMILY beta-beta-alpha zinc fingers 99 197 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3029 Aev-Chr4 30026686 30030476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3029 70 292 IDZ Gene Family AT3G45260 68.860 3.04e-112 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g3029 zf-C2H2 0.011 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3029 K25870 - gmx:100781896 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3029 04 30026686 30030476 Aev04g3029 04 30026686 30030476 ECH
Aev10g1896 10 20467212 20469263 Aev04g3029 04 30026686 30030476 PCT