Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3023 ATGGCTTCTTCCTCAAACAACTCCAAATCTGATAAGACGAAGAAGAAGAAGACCAAAATCGCAGAGGAAGAATCCAATGTCGAAAATCATAAGAAGAAGAAGAAGAGACCTAAAATCGTAGAAGAAGAATCCAAAGCTGAAAATCGGAACAAGAAGAAGAAGAAACCTAAAACCGCAGAAGAAGAATCCAAAACCGAAAATCAGAAGAAGAAGAAAAGAAAAACTGCAGAAGAGAAATCCAAAACCGTTAGCAGCAAATTGAGCAAAGAGAGGGACTCGGAGAAGGAGAAGGAGAACAAAAAGAACAACAACGCTAAGAAGAAGAAGAAGAAGCTCGAGCTCATCAATGGAAACTCAGAGAAGCACCGCGATGAATTGTTGATCGTTCCGAGCTCCAGCACTGAGTCACAACAAAAGCATGAAGATAAGACTGTACTCAGCAATGGACGAAGCAACGGTCAAAAACCTAAGAAATCGAAACGGAAGCGAGAGGAGGAGGTAGAGGAAGAGGAAGGAGACGCGAAAACGCACGTGTTTCCGATGAATCGGATAAGGACGATGATTAAAGGCGAAGATCCAGATTTGCGCGTTTCTCAGGAAGCGATTCTGGTCATCAACAAAGCTACGGAGAAATTCCTTGAGCAGTTTACGCAGGACGCTTATGTTCGTTGTGTTCAGGATCGTAAGAAGTCTCTGAGTTACAATCATCTAGCGCACGTTGTGAATAAGCAGAGAAGATATGAATTTCTTTCTGATTTTGTTCCTGAGAAAGTGAAAGCTGCGGATGCATTAAGAGAGAGAAATTCAGGAGGGAACTGA 819 0.4237 MASSSNNSKSDKTKKKKTKIAEEESNVENHKKKKKRPKIVEEESKAENRNKKKKKPKTAEEESKTENQKKKKRKTAEEKSKTVSSKLSKERDSEKEKENKKNNNAKKKKKKLELINGNSEKHRDELLIVPSSSTESQQKHEDKTVLSNGRSNGQKPKKSKRKREEEVEEEEGDAKTHVFPMNRIRTMIKGEDPDLRVSQEAILVINKATEKFLEQFTQDAYVRCVQDRKKSLSYNHLAHVVNKQRRYEFLSDFVPEKVKAADALRERNSGGN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3023 272 Coils Coil 59 79 - -
Aev04g3023 272 MobiDBLite consensus disorder prediction 109 128 - -
Aev04g3023 272 Gene3D Histone, subunit A 136 256 IPR009072 GO:0046982
Aev04g3023 272 Coils Coil 13 33 - -
Aev04g3023 272 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 31 269 - -
Aev04g3023 272 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 31 269 - -
Aev04g3023 272 MobiDBLite consensus disorder prediction 158 178 - -
Aev04g3023 272 SUPERFAMILY Histone-fold 144 250 IPR009072 GO:0046982
Aev04g3023 272 Coils Coil 90 115 - -
Aev04g3023 272 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 179 241 IPR003958 -
Aev04g3023 272 MobiDBLite consensus disorder prediction 1 178 - -
Aev04g3023 272 MobiDBLite consensus disorder prediction 9 101 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3023 147 238 CCAAT-HAP5 Transcription Factor Family AT1G07980 42.391 2.33e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev04g3023 CBFD_NFYB_HMF 3.9e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3023 - - adu:107476944 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3023 04 29993140 29995047 Aev04g3023 04 29993140 29995047 ECH