Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3009 ATGGGTAAAGATGATGTAGAGGTACAAGAGGAAAGAGGAGGAAAAGACTACAATGAGCCTCCACCAGCAGCATTGATAGATGCAGAGGAGCTGACTCAGTGGTCACTGTACAGAGCAGTGATAGCAGAGTTCATAGCAACTCTTCTCTTCCTTTACATCACTGTTCTCACCATCATTGGCTACAGCACCCAGACTGATTCCACCAAAGGAGCCTCTGACTGTGATGGTGTTGGCATTTTGGGTATTGCCTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGTATCTCTGGAGGACACATAAACCCTGCAGTGACATTTGGGCTGTTGGTTGGGAGGAAGGTGTCACTAGTAAGGGCATTCCTTTACATAGTAGCACAGTGTGGTGGTGCAATATGTGGGACTGGACTTGCAAAGGGATTCCAAAAAGCTTACTTTGATAGGTATGGTGGTGGTGCCAACTTTGTGCATGATGGATACAGCAAAGGCACTGCTCTTGGAGCTGAGATTATTGGTACCTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCTAAGAGGAATGCTAGGGACTCCCATGTTCCTGTGTTGGCACCACTGCCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACAATCCCAGTGACAGGAACAGGCATCAACCCTGCAAGAAGCTTCGGATCTGCTGTCATTTACAACAAGGACAAAATCTGGGATGACCATTGGATTTTCTGGGTTGGACCAATAATTGGAGCTGCAGCAGCTGCAATATACCACCAACACATTCTAAGGGCAGCAGCAATCAAGGCCCTTGGATCCTTCAGGAGCAACAACTAA 855 0.4749 MGKDDVEVQEERGGKDYNEPPPAALIDAEELTQWSLYRAVIAEFIATLLFLYITVLTIIGYSTQTDSTKGASDCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLVGRKVSLVRAFLYIVAQCGGAICGTGLAKGFQKAYFDRYGGGANFVHDGYSKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGSAVIYNKDKIWDDHWIFWVGPIIGAAAAAIYHQHILRAAAIKALGSFRSNN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3009 284 Pfam Major intrinsic protein 30 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 6 283 IPR034294 -
Aev04g3009 284 CDD MIP 38 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 MobiDBLite consensus disorder prediction 1 20 - -
Aev04g3009 284 PANTHER AQUAPORIN PIP2-4-RELATED 6 283 - -
Aev04g3009 284 TIGRFAM MIP: MIP family channel proteins 42 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3009 284 MobiDBLite consensus disorder prediction 1 17 - -
Aev04g3009 284 Gene3D Glycerol uptake facilitator protein. 23 284 IPR023271 -
Aev04g3009 284 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Aev04g3009 284 SUPERFAMILY Aquaporin-like 30 270 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3009 Aev-Chr4 29894936 29896874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3009 4 282 Major Intrinsic Protein MIP AT2G37170 78.136 2.86e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3009 K09872 - gmx:100811119 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3009 04 29894936 29896874 Aev04g3009 04 29894936 29896874 ECH
Aev10g1910 10 20556318 20557476 Aev04g3009 04 29894936 29896874 ECH
Aev10g1910 10 20556318 20557476 Aev04g3009 04 29894936 29896874 PCT