Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2999 ATGGATTCTGCTATCAAGTTCTGTGCTTTGCTGGTGCTGTTGCTTGGATTAGTAAATGATTCTCTTGCAAATAGTGATTTTGAGCATTGCGAAAGAGTTGTTAAGAGTTGGGCAGAATCATCGTTTGATCATGAAATCAGGGAAGATAAGCACACACTGAGGGAGTTGTTGTTCTTCCTCCATGTTCCTAGAACAGGAGGGCGCACATATTTTCGCTGTCTTTTGAAGAAATTGTATCCCAACTCTCTGGAATGCCCTCTCTCTTATGATAGATTGCGCTTTGATCCAAGCAAAGTAAAATGTAGGCTGTTAGTTACACATGATGACTATAGCGTGACTTCCAAACTTCCGAAGGAGAGAACTTCAGTCGTTACCATACTTAGGGATCCAGTTGACCGTGTCTTCAGTACTTATGAATTTTCAATAGAAGTTGCAGCTAGGTTTTTGGTGCATCCAAACTTGACTTCTGTAACACAGATGACTAAAAGCGTGCGCAATAAGGCCAAAGGAGTTAGCACACTTGATATCTGGCCATGGAAGTATCTGGTCCCGTGGATGAGGCTAGACTTATTTGAAAGGAGAGAATCTAGGCGTAGTAGGGGACGAGATATCATTAAGAGCAGTGATTCTTATGACATGGAAGATTTTGCAATGCCACTACATGAATACATTAATCATCCTGCAGCTGGGGATATTATACATAATGGAGCCACATTTCAGGTTGCAGGTTTGACAAACAATTCTTATATGGCAGAAGCACATGAGGTGCGCCATTGTGTACAGAAGCACAAGATTCTTGGCAAACATGTTCTACAAGTTGCAAAGAAGAGACTGGATGATATGTTATACGTTGGTCTTACTGAGGAGCACAGAGAATCTGCAACGATGTTTGCAAATGTGGTCGGTGCTCAGGTGATATCACAACTTAATGCTCCAAATACTACTATCTCAGATATTAATAATACAGAACAGAGTTCATTTCTGGATTCTGATCCTGATGGCAGTATACATCAGAATGGCACCTCAGACATGAGAGCAGGCGACGTTACTTCGAGTGAAAGTGGAGAAGCAACGGGATTAAGTATGTCTGTTGGCGAGCTTATGAATGCTTATGAAGGCTGTATTTCTAATTTGCGCTCGGCCCAGTCAAAGCGGCGCATAACTTCTCTGAAGAGGATTTCTCCAGTGAACTTTACAAAAGAGGCGCGCCTTCGAGTTCCTGAAGAGGTTATCCAGGAGATACGGTCGCTTAACGACCTGGACTTGGAGCTTTACGAATATGCAAGAGCGATTTTCTCTAAACAACATAAATCTACAATGCAGACATTTACTGAGGAGAAATGGGAAACCATACCAAACAGTGCCTTAGGCATCATTACCTTATGGAAAGTTCTTCCGTTGGGAATCACTTTTGCCTTTCTACTTGTCTTACTCCTACTAATTGTAAATGTCAGAAGAAGAACGTTGAAGGTTATTGCTGATATGAAGGACTGTTGGTTTTTTGACAACAATTTCAACGGTGTATCGGACGAAGTTTTTGACAATGTGGTGGGGTTTTTTGATTTCCCTATAGAAGATGTGGGAGATGATGTTGTGGAGGAAGATTGGGATGCTCAGTTTAAGCACATTGAAGAGCCAGCTTTTGGTGTGTTCTCAGTGCCGTCATCTGGGCTGCGCAACAAAAATGAGAATGACAACGCAAAACTTGGGAGGAGTTTCTCGGCTTCTCCTGCAGGGACTGCTAGACCTACATATGGCAAGACCATTCCCAAGCAGAATGTATCTTTCAATGGCAAAGATGTGAACAAATTCCATACCTACAGCCCGGTTTCTGTTTTCGAAAGCAGTAGTTCTTCCTCTGTGGAGAACTCCAACTTTGATTTACCTGTCATCCCAGTAAAGCGTCCTCGTGGCAAACGTCAGCGTATCTCAAGCTTCAGCCTGCTACTCTCAGTTCCTTTCATCTCGAGTGCATCAGGTTTTCAGAAAGATGAAAGGAGAGGAGTCTCTGAATCTGAGTTACAAACACAACCTGCCGAGAAGTTGTTAAATAGAGTGAAAAAGAAGCTGATAAGAAAGGATCTCCTCTCAGACCGTATCGAGAAGATGAGACCCTCACCACAAGAGTCAGATGCCTCCAGAAAATGCATGCATTGTGAGGTGACGTCAACACCGCAATGGAGAGAGGGACCTACAGGTCCAAAGACCCTTTGCAACGCATGTGGGGTTCGATATAGGTCCGGCCGACTCTTCCCCGAATACCGTCCTGCAGCTAGCCCCACTTTTGTAGCATCATTGCACTCAAACTCTCACAAGAAGGTCGTTGAAATGAGAACCAGAGCCGCAAAGGAGACTATTAGGGTTCCCTCTGTGTTCTCTTCATCATCAAACCTTCATGGAAATCATCTAGGCTAA 2415 0.4348 MDSAIKFCALLVLLLGLVNDSLANSDFEHCERVVKSWAESSFDHEIREDKHTLRELLFFLHVPRTGGRTYFRCLLKKLYPNSLECPLSYDRLRFDPSKVKCRLLVTHDDYSVTSKLPKERTSVVTILRDPVDRVFSTYEFSIEVAARFLVHPNLTSVTQMTKSVRNKAKGVSTLDIWPWKYLVPWMRLDLFERRESRRSRGRDIIKSSDSYDMEDFAMPLHEYINHPAAGDIIHNGATFQVAGLTNNSYMAEAHEVRHCVQKHKILGKHVLQVAKKRLDDMLYVGLTEEHRESATMFANVVGAQVISQLNAPNTTISDINNTEQSSFLDSDPDGSIHQNGTSDMRAGDVTSSESGEATGLSMSVGELMNAYEGCISNLRSAQSKRRITSLKRISPVNFTKEARLRVPEEVIQEIRSLNDLDLELYEYARAIFSKQHKSTMQTFTEEKWETIPNSALGIITLWKVLPLGITFAFLLVLLLLIVNVRRRTLKVIADMKDCWFFDNNFNGVSDEVFDNVVGFFDFPIEDVGDDVVEEDWDAQFKHIEEPAFGVFSVPSSGLRNKNENDNAKLGRSFSASPAGTARPTYGKTIPKQNVSFNGKDVNKFHTYSPVSVFESSSSSSVENSNFDLPVIPVKRPRGKRQRISSFSLLLSVPFISSASGFQKDERRGVSESELQTQPAEKLLNRVKKKLIRKDLLSDRIEKMRPSPQESDASRKCMHCEVTSTPQWREGPTGPKTLCNACGVRYRSGRLFPEYRPAASPTFVASLHSNSHKKVVEMRTRAAKETIRVPSVFSSSSNLHGNHLG* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2999 804 PANTHER HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 1 441 IPR010635 GO:0008146|GO:0016021
Aev04g2999 804 Gene3D - 710 760 IPR013088 GO:0006355|GO:0008270
Aev04g2999 804 SMART GATA_3 710 760 IPR000679 GO:0006355|GO:0043565
Aev04g2999 804 Pfam GATA zinc finger 716 749 IPR000679 GO:0006355|GO:0043565
Aev04g2999 804 ProSitePatterns GATA-type zinc finger domain. 716 741 IPR000679 GO:0006355|GO:0043565
Aev04g2999 804 CDD ZnF_GATA 715 762 IPR000679 GO:0006355|GO:0043565
Aev04g2999 804 Gene3D - 53 339 IPR027417 -
Aev04g2999 804 ProSiteProfiles GATA-type zinc finger domain profile. 710 746 IPR000679 GO:0006355|GO:0043565
Aev04g2999 804 PANTHER TYROSYLPROTEIN SULFOTRANSFERASE-RELATED 1 441 - -
Aev04g2999 804 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 712 773 - -
Aev04g2999 804 MobiDBLite consensus disorder prediction 323 357 - -
Aev04g2999 804 MobiDBLite consensus disorder prediction 564 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2999 Aev-Chr4 29770839 29783238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2999 502 780 C2C2-Gata Transcription Factor Family AT1G08010 38.754 3.66e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev04g2999 GATA 1.2e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2999 K22218 - gmx:100810026 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2999 04 29770839 29783238 Aev04g2999 04 29770839 29783238 ECH
Aev10g1917 10 20627432 20630731 Aev04g2999 04 29770839 29783238 ECH
Aev10g1917 10 20627432 20630731 Aev04g2999 04 29770839 29783238 PCT