Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2982 ATGGGAAGCAAATGGAGAAAAGTGAAACTTGCACTTGGTTTCAACACTTGTGCTCACATTCCAAGAGCTATAGATGATTCTTCCTCCTCCTCCCTCAACACCGCCGCCGCAGCAAGATTTTCCGACGTTACCTCCCCGGCCGGCGGGTACTCCGGCTACCAGTCAACCACCCCAACACCGTCTTCCTCTGGTCTCAAGTTACCCAAATCACCAAAGGGGACTTGTGCAATATGCCTTAACACAATGAAACCAGGGCAGGGCCATGCCATCTTTACTGCGGAATGTTCCCACTCTTTTCACTTCCACTGTATCACTTCTAATGTGAAACATGGGAACCAGATTTGCCCTGTGTGTAGAGCAAAATGGAAAGAAATTCCTTTTCAGAGTCCTGCTTTGAATGGCTCCCATGACATGTCTCGAATCAACCAAGTATCCCCACGAGATGATGCCTGGACAACTGTCATTAGGAGGATTCCTTCGCCACAAGGGGATGCAGGTCGGCAGATTTCATCGCTTTATCATGTTCCCGAACCAGCTATCTTCGATGATGATGAAGCCTTGGATCAACAAACTTCAGTTACCAACAATAAAAATGAGGCCGATAAAGAGATTATAGATAGAATGGAGATCAAAACATATCCTGAAGTTTCAGCTGTACCAAAGTCAGCCTCCCATGATAATTTTGCTGTACTAATTCATCTCAAAGCTCCTCGTGCAGGCAGTAAACAAAATAGTGTAGGAAACAACACTGAACTGCCGCCACCAGCTCAAAATTCTCGTGCTTCTGTTGATCTTGTTACAGTTCTTGATGTAAGTGGTAGCATGGGAGGCACCAAGCTTGCATTGCTAAAACGAGCTATGGGTTTTGTCATACAGAATCTGGGACCATCAGACCGTCTATCTGTCATTGCCTTCTCCTCCACAGCACGCCGCATTTTCCCTCTTCGGCAGATGACTGATTCCGGACGACAGCAGGCATTACAGGCTGTCAATTCTTTGGCTGCTAATGGTGGGACGAACATTGCTGAAGGCTTGAGGAAAGGTGCCAAGGTGTTTGTTGAGCGCCGGTCGAAGAACTCGGTTAGCAGCATCATATTACTATCTGATGGGCAGGATACATACACAGTCAATAGCAGGCCCAGTGTCGGAGCAGATTACCAGTCACTCGTCCCGAACTCCATTCATCGCAATAATGGTGCAGGCTTGCATATACCAGTGCATGCTTTTGGCTTTGGTTCTGACCATGATGCTACTTCAATGCATTCAATCTCCGAAATATCTGGTGGTACATTTTCCTTCATTGAAGCTGAAGATGTGATTCAGGATGCATTTGCGCAATGTATCGGAGGACTCTTGAGTGTCGTGGTGCAGGAACTACAAGTTGAAGTTTCATGCATCCACCCTCATCTGCAACTTCGTTCAGTAAAAGCTGGAAATTACCAAACAAGCTTGACGGCCGATGCAAGAACGGCTTCCATTACCGTGGGAGATCTGTATGCTGAAGAAGAAAGAGACTTTTTGGTGATGTTCAATGTTCCGGTTGACAAGTCGAGTGATGAAATGTCATTGTTGACAGTTAAAGGTCTCTATAGAGACCCCATCACAAAAGAAATGGTGTCCTTGGAAACAAACAGTGAAGTGAAAATTCAAAGAGCTAACGTCGGTAGAGAAGAACTAGTTGTGTCAATAGAAGTAGACAGGCAGCGAAACAGGCTTCGAGCAGCAGAGGCAATAGCCGAGGCTAGAGTTGCAGCCGAACGCGGCGATCTGTCTGCTGCGGTTTCAGTCCTGGACAGCTGTCATAAGGCTTTGTCTGAAACCGTTTCTGCCAAAGCCGGGGACCGGTTATGTGCTGCTCTTTCTGCCGAGTTAAAGGAAATGCAGGAGAGGATGGCTAGCCAGCGCGTTTATGAGCAGTCTGGAAGGGCTTATGTGCTGTCGGGATTGAGCTCACATTCGTGGCAAAGGGCAACTGCAAGAGGCGATTCGACAGATAGCACGAGCCTTGTGCAATCATACCAAACTCCTTCTATGGTTGACATGGTAACCCGCTCTCAGACCATGATTTTAGGTGCTCCACAAAATAGGCGTGTCCTTAGGCCTGCTAAATCATTTCCTGACAGGCAGCAAAGAGGACACTAA 2142 0.472 MGSKWRKVKLALGFNTCAHIPRAIDDSSSSSLNTAAAARFSDVTSPAGGYSGYQSTTPTPSSSGLKLPKSPKGTCAICLNTMKPGQGHAIFTAECSHSFHFHCITSNVKHGNQICPVCRAKWKEIPFQSPALNGSHDMSRINQVSPRDDAWTTVIRRIPSPQGDAGRQISSLYHVPEPAIFDDDEALDQQTSVTNNKNEADKEIIDRMEIKTYPEVSAVPKSASHDNFAVLIHLKAPRAGSKQNSVGNNTELPPPAQNSRASVDLVTVLDVSGSMGGTKLALLKRAMGFVIQNLGPSDRLSVIAFSSTARRIFPLRQMTDSGRQQALQAVNSLAANGGTNIAEGLRKGAKVFVERRSKNSVSSIILLSDGQDTYTVNSRPSVGADYQSLVPNSIHRNNGAGLHIPVHAFGFGSDHDATSMHSISEISGGTFSFIEAEDVIQDAFAQCIGGLLSVVVQELQVEVSCIHPHLQLRSVKAGNYQTSLTADARTASITVGDLYAEEERDFLVMFNVPVDKSSDEMSLLTVKGLYRDPITKEMVSLETNSEVKIQRANVGREELVVSIEVDRQRNRLRAAEAIAEARVAAERGDLSAAVSVLDSCHKALSETVSAKAGDRLCAALSAELKEMQERMASQRVYEQSGRAYVLSGLSSHSWQRATARGDSTDSTSLVQSYQTPSMVDMVTRSQTMILGAPQNRRVLRPAKSFPDRQQRGH* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2982 713 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 710 - -
Aev04g2982 713 SUPERFAMILY RING/U-box 71 125 - -
Aev04g2982 713 ProSiteProfiles Zinc finger RING-type profile. 75 119 IPR001841 -
Aev04g2982 713 MobiDBLite consensus disorder prediction 49 68 - -
Aev04g2982 713 Pfam von Willebrand factor type A domain 264 445 IPR002035 -
Aev04g2982 713 CDD RING-H2 75 119 - -
Aev04g2982 713 SMART ring_2 75 118 IPR001841 -
Aev04g2982 713 Pfam RING-like zinc finger 75 104 IPR001841 -
Aev04g2982 713 Pfam VWA / Hh protein intein-like 614 687 IPR032838 -
Aev04g2982 713 SUPERFAMILY vWA-like 261 448 IPR036465 -
Aev04g2982 713 ProSiteProfiles VWFA domain profile. 264 448 IPR002035 -
Aev04g2982 713 PANTHER RETROELEMENT POL POLYPROTEIN-LIKE 3 710 - -
Aev04g2982 713 CDD vWA_C3HC4_type 263 435 - -
Aev04g2982 713 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 207 IPR013083 -
Aev04g2982 713 SMART VWA_4 262 444 IPR002035 -
Aev04g2982 713 Gene3D von Willebrand factor, type A domain 264 449 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2982 Aev-Chr4 29598304 29603717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2982 10 124 Rapid Response to Elicitors AT3G05200 32.500 4.45e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2982 - - gmx:100818406 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2982 04 29598304 29603717 Aev04g2982 04 29598304 29603717 ECH