Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2979 ATGAACCCTAATGAGGTGCTTCAACTGAACAACCTTACAAATTCTTCTGAGGTTCTCAAAGAAGGTAAAGATGTTCTTATCCCTATTATGTGTACTTGCTCAGGACAATTTTATCAAGCAAGATTTAGCTATAAAGTTCCTTATAACACAACATTTTCCAAGGTTGCATGTGAGGTGTTTGAAGGAATGCTGAAACCATTCACACTTTCTCAGGAGAACATTCCACAAGGGAATAAACTAGAAGCTGGTTTTGAACTTCATGTTCCTCTTAGATGTGCTTGTCCTTATGATAATTTCACTAGTACCATGGAAGTGAAGTACCTTGTCACATACCCTTTAATGGAAGATGATGACCCAGATAAATTGGCCAAGAAATTTGGTATCTCAAAGGAAGATTTCTATGAAGTTAACCATATAGGTCCATGGTCAACAATTTTCATAGGCACTACTGTTTTGATTCCAATAAGGGATGATTCAATTAGAATTCATGATGTTCCTGATTCTCCTTCTCCACCACCTGGTTTTCTCCCCACAGTTCCAATGGTTAAGACACAACAAACAACACAAGCCTCAAGTTTGTACATTGCAGGACCTATCATATTAGGATTTGGTTTGATCATAACACTACTTGCAAGTGGATTATATGTGAAGAGCTTGAAGAATTCAAAGAGTAGTGAAGTTGTCCCTTCCTCCTCCAATAATACAAATTCCCCGGCATTGTTCTCGCCGATGAGAAGCACTGTTATATCTAGCAGAACTGGTAGAAGCTCCACAGTTTCGTGTCTAACCCCGGATCTTCTTGCCGAAATCAAGTACTGCTTGGTTAACTACAAACTAGAGGAGATTGAGAAGTCCACAAGGAATTTCAGTGAGGAAAATATGATTGGTGATATGGTCTATAAGGGCAAGGTCAGTAATCTTGAGGAGGTTATGATAAAGAGGATGAGGTTTGAAGACACTGGCCAGGTAATTGATTTGCATTCCAAAATCAATCATTTTAACATTGTGGAATTGCTTGGAGTTTGCTATGGTGAGAGCAAAGCTTCATGGTCTTATCTAGTTTTTGAGTTGCCTAAAAATGGTTGCTTAAGGGAATGTTTATCTGATCCATGCAATGCTCTGAACTGGTTTAGAAGGACACAAATAGCATTTGATATTGCAACATGTCTTTACTATTTACATTGTTGTGCTTTTCCTTCATATGCTCACATGAATGTCAATAGTAGAAATATATTTATAACATCAAAATGGAGGGGAAAGCTAGCAGATGTTGGTAAAGCATTGGCAACAAATTCCATCAAACCCCAAAAAAGAAATGACAGTGCAAAATTTGCTAAAGGATGGTTGGCACCAGAGTACCTAATGCATGGCACAGTTTCTGAAAAGGTGGACATTTTTGCATTTGGTGTTCTGTTGCTTGAGCTGATATCAGGAAGAGACAACTTTGATAGGAAATTAGTCAAAGATTCTCTTGGATTCTTGTTGGGGGAAGCAAATGAAGGTGGTTGTTTTGAAGGATTAAGGAGTTTCATGGATCCTAATCTGAAAGATTATGATGTTCCAGAGGCTCTGTGTTTGTCTTTTCTAGCAAAGGATTGTGTAGCAGATGATCCAATGCATAGACCAACTATTGAAGATATCATGAAAGTCCTTGTGAAAATGGTTTAG 1668 0.3807 MNPNEVLQLNNLTNSSEVLKEGKDVLIPIMCTCSGQFYQARFSYKVPYNTTFSKVACEVFEGMLKPFTLSQENIPQGNKLEAGFELHVPLRCACPYDNFTSTMEVKYLVTYPLMEDDDPDKLAKKFGISKEDFYEVNHIGPWSTIFIGTTVLIPIRDDSIRIHDVPDSPSPPPGFLPTVPMVKTQQTTQASSLYIAGPIILGFGLIITLLASGLYVKSLKNSKSSEVVPSSSNNTNSPALFSPMRSTVISSRTGRSSTVSCLTPDLLAEIKYCLVNYKLEEIEKSTRNFSEENMIGDMVYKGKVSNLEEVMIKRMRFEDTGQVIDLHSKINHFNIVELLGVCYGESKASWSYLVFELPKNGCLRECLSDPCNALNWFRRTQIAFDIATCLYYLHCCAFPSYAHMNVNSRNIFITSKWRGKLADVGKALATNSIKPQKRNDSAKFAKGWLAPEYLMHGTVSEKVDIFAFGVLLLELISGRDNFDRKLVKDSLGFLLGEANEGGCFEGLRSFMDPNLKDYDVPEALCLSFLAKDCVADDPMHRPTIEDIMKVLVKMV* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2979 555 Pfam LysM domain 121 154 IPR018392 -
Aev04g2979 555 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 2 554 - -
Aev04g2979 555 Pfam Protein tyrosine and serine/threonine kinase 323 549 IPR001245 GO:0004672|GO:0006468
Aev04g2979 555 ProSiteProfiles Protein kinase domain profile. 204 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g2979 555 CDD LysM 121 153 IPR018392 -
Aev04g2979 555 SUPERFAMILY Protein kinase-like (PK-like) 272 551 IPR011009 -
Aev04g2979 555 Gene3D Transferase(Phosphotransferase) domain 1 359 555 - -
Aev04g2979 555 ProSiteProfiles LysM domain profile. 109 153 IPR018392 -
Aev04g2979 555 Gene3D Phosphorylase Kinase; domain 1 254 356 - -
Aev04g2979 555 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2979 Aev-Chr4 29564543 29566210 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2979 1 555 Receptor kinase-like Gene Family AT2G23770 28.952 1.92e-58 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aev04g2979 PK_Tyr_Ser-Thr 4.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2979 - - gmx:100818937 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2979 04 29564543 29566210 Aev04g2979 04 29564543 29566210 ECH