Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2976 ATGAACTTCAACTTAAGGCCTGAATTGCATGTTGCACAACAATTTCGACGAGACAAGTTGAGAATCCAGAACAGTACTAATAACAACAACCCTCAGCATCATTTTCAAGACTACTTCCCTAACAACATTGAACAACTATCACTACAACAACAACAACAACAAGGCCTCAACTTGGATAATCTCCTTCAAGTTAGGTCCATCAGAACTAATAATGCCACCAACATGCTTGATGAAGTGCCTCAACCACAACCACAACAACAACAACCTCTCTATTCTTCCTCACAAATCATGACTTTATCGTCGGCGGCGACGGCGGCCCCGACGATAATGCCTCATGGTTGGATGGTGAACTATGCAACAAATGAGATCAATGATGCAATGTCTTCACAAAACAGTACATGTGGAGAAATGCATTATCCTAACTCTGCTTCTACAAATCCAATTTATCACCACAATAATGCTTTGCAGGACATTTTCAACAAGGGAGGCTCTAATAATTCTATGATCATTAGCCATGGATCAGAAATTGCTTCATCATTGATGCATTGGGGAGGAGGAGATCATCAAAACTATGGGGGTGTTGAGAATGACAATAATACCCTCGGTTGGTGGAATAATAATAATACTAATACTAATAGTCCTCTGGGGTTAACAGAGAAAAAGGCACATCAGGGCTTGTCATTATCACTCTCATCAAACTCACAACAATCCAATAAGCCTTCTTGTGGTGAAGGCTCTGCATCAAATGACCCTCAATCCAACAACATTAACATTTTGAAATCTCCTATGATGATGAAGCCTTCAATTATTAATAGTAATAATAATAATGTTTCTGGAGATTGTCCTGCAGGAAAATCATCATCATCTCCAAATACTAAGTGTTACAGAAATGTCGGCCCTCTTGGACCTTTCACCGGATATGCAACAATTCTCAAGAGTTCAAGGTTCTTGAAACCATGTCAACAGCTTCTCGATGAATATTGCTGCCAGCAATCTGGTTTTTCATCAAAACCAGATCGCGGTAATAACAACAATAAAGGTTGTGATGATGAGGATATTCCAGAGTGGGTTTCTAGAGATCATAATAATAATTTATTGGATGAAAGTAGTAATGGTGGGATTGGTGGTGGTAGTAATGCAGGTTCTTCTTCATCATCCATGTTCTATGGTTCAAAAGGTAATAGTAGCAATAATACTAATAATGGTGGAGCTGCTGCTAGTAATAACTTTTGTGCTTCTTCTTCTTCTTCTGCTTCTCGGCCAGAGTGCCAAAAGAATAAAGCAAAGCTGGTGTTCATGCAAGATGAGGTTACCAGAAGATACAAGCAATACCATCAACAGATGCAAATGGTTGTTTCCTCCTTCGAGTCAGTAGCGGGTCTTAACTCCGCCACGCCTTACATTTCCTTGGCTCTCAAGTCAGTCTCAAGACACTTCCGGTGCCTAAAGAACGCTATCTCGGATCAGCTCAAGCTCATATGTGAAGCATTGGGAGAGGATTTTTCGATACCGGCGACTAGTCCTAGCAGTAGTAAATTTGACACTAGCAACATTGCGAGGCTAAGGTGTATGGAGCAAAGCTTTCAAAGGAACAAATCTGGTAACATGGACTTCATTGAACAACACCAATTGCAACAACATCCATGGAGGCCCCAGAGAGGCTTGCCGGAACGATCCGTGGCGATTCTTAAAGCTTGGTTGTTCGAGCATTTTCTTCATCCGTACCCCACAGACACTGATAAACACATGTTAGCTTCTCAAACTGGCTTATCACGAAACCAGGTATCGAATTGGTTCATAAATGCTCGTGTACGTGTTTGGAAGCCAATGGTTGAGGAAATCCACATGCTTGAAACAAAAGGAGGCATCATGGAAGGTGCAAATCGAAGCTCAAGCAAAAACGAAGGAATAATAAATTCAGCCTCAGAAGGTAGCACCAACCATCATAATCATGATCATCAACATCTTAACATCATGTTTGGCAATGATGTTACTGCAATCCAAGAAAGGCAATTCCAGTGTTTGGAAATGGGGTCATCATCATCCTTAGCTAGTGCCAATGAGGAAGGACAATGGAATCAAGAGAAGAGGTCGAAATTGGAGTGCCAGGTTACATCTGGCATGGATCATGGGACACTTATGGGTTTCATGCCGTTCCGGCACGGTGCCGGTGCCCTCGATGTCGGGGGACTCGGCCCCGTGTCGCTTACTTTGGGACTAAGGCACGGCGAAGGCGCGCCGCAGCAGCAGCAACAACAACTACAGCATGAGGAGCAGCTTCGGCGCCATTTTGGAGGGCACATGATCCATGACTTTGTGGGCTAA 2325 0.428 MNFNLRPELHVAQQFRRDKLRIQNSTNNNNPQHHFQDYFPNNIEQLSLQQQQQQGLNLDNLLQVRSIRTNNATNMLDEVPQPQPQQQQPLYSSSQIMTLSSAATAAPTIMPHGWMVNYATNEINDAMSSQNSTCGEMHYPNSASTNPIYHHNNALQDIFNKGGSNNSMIISHGSEIASSLMHWGGGDHQNYGGVENDNNTLGWWNNNNTNTNSPLGLTEKKAHQGLSLSLSSNSQQSNKPSCGEGSASNDPQSNNINILKSPMMMKPSIINSNNNNVSGDCPAGKSSSSPNTKCYRNVGPLGPFTGYATILKSSRFLKPCQQLLDEYCCQQSGFSSKPDRGNNNNKGCDDEDIPEWVSRDHNNNLLDESSNGGIGGGSNAGSSSSSMFYGSKGNSSNNTNNGGAAASNNFCASSSSSASRPECQKNKAKLVFMQDEVTRRYKQYHQQMQMVVSSFESVAGLNSATPYISLALKSVSRHFRCLKNAISDQLKLICEALGEDFSIPATSPSSSKFDTSNIARLRCMEQSFQRNKSGNMDFIEQHQLQQHPWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLASQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGGIMEGANRSSSKNEGIINSASEGSTNHHNHDHQHLNIMFGNDVTAIQERQFQCLEMGSSSSLASANEEGQWNQEKRSKLECQVTSGMDHGTLMGFMPFRHGAGALDVGGLGPVSLTLGLRHGEGAPQQQQQQLQHEEQLRRHFGGHMIHDFVG* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2976 774 ProSiteProfiles 'Homeobox' domain profile. 546 609 IPR001356 GO:0003677
Aev04g2976 774 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 47 744 - -
Aev04g2976 774 SUPERFAMILY Homeodomain-like 550 615 IPR009057 -
Aev04g2976 774 MobiDBLite consensus disorder prediction 625 652 - -
Aev04g2976 774 Pfam Homeobox KN domain 566 605 IPR008422 GO:0003677|GO:0006355
Aev04g2976 774 CDD homeodomain 549 610 IPR001356 GO:0003677
Aev04g2976 774 SMART HOX_1 549 613 IPR001356 GO:0003677
Aev04g2976 774 Pfam Associated with HOX 310 487 IPR006563 -
Aev04g2976 774 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 47 744 - -
Aev04g2976 774 MobiDBLite consensus disorder prediction 335 356 - -
Aev04g2976 774 Gene3D - 552 614 - -
Aev04g2976 774 MobiDBLite consensus disorder prediction 226 290 - -
Aev04g2976 774 SMART prehox3 305 488 IPR006563 -
Aev04g2976 774 MobiDBLite consensus disorder prediction 625 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2976 Aev-Chr4 29540988 29547321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2976 264 619 Homeobox Transcription Factor Family AT5G02030 43.288 6.18e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aev04g2976 POX 1.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2976 - - gmx:100810379 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2976 04 29540988 29547321 Aev04g2976 04 29540988 29547321 ECH
Aev10g1931 10 20730328 20734893 Aev04g2976 04 29540988 29547321 PCT