Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2972 ATGGATCGTAAGAAGAAAGTGAACAGAAGAGAAGAACATGAAGTTCTCTTGAAACCAGCATGTGCTGCACGTCTATTTCAGCTCACGCGTGAGTTAGGACTCAAGACTCATGGAGAGATAATTGAATGGCTATTGGACCACGTTGAGCCCTCTGCAACAAACGGTAAGGCAATATCATCATCTTCTTCTTTACCTTCTTCTGTTGTTGTTAATGCATCATCAACGTTATGTGAGGATAAGAATGATGTTGGTGAAAGTGTCGAGGGTGAAAATGGGTTGTTTTTGTCACAAAAGGATATTGAAGCGTTAGCAAGCATTGGAGTGATGTTTTCTGCTAGTGAGATAGCGACAATCCAATCTATGTTGAAGAAGTTTAGCTGA 381 0.4068 MDRKKKVNRREEHEVLLKPACAARLFQLTRELGLKTHGEIIEWLLDHVEPSATNGKAISSSSSLPSSVVVNASSTLCEDKNDVGESVEGENGLFLSQKDIEALASIGVMFSASEIATIQSMLKKFS* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2972 126 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 2 123 - -
Aev04g2972 126 ProSiteProfiles TCP domain profile. 1 55 IPR017887 -
Aev04g2972 126 Pfam TCP family transcription factor 2 69 IPR017887 -
Aev04g2972 126 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 123 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2972 Aev-Chr4 29501787 29502167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2972 2 94 TCP Transcription Factor Family AT5G41030 40.206 2.53e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev04g2972 TCP 2.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2972 - K16221 ahf:112736155 100.523