Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2971 ATGAATTTTTCTGAGGCCACCATGGATCGTAAGAAGAAAGTGAACAGAAGAGAAGAACATGAAGTTCTCTTGAAAGCAGCATGTGCTGCACGTCTATTTCAGCTCACACGTGAGTTGGGACTCAAGACTCATGGAGAGACAATTGAATGGCTATTGGACCACGTTGAGCCCTCTATTGCTGCAACAAACGGCAAAGGAATATCATCATCTTCTTCTTTAACTTGTTATGTTGTTGTTAATTCATCATCAACGTTATGTGAGGATAAGAATGATGTTGGGGAAGGTGACGAGGGTGAAAAGGGTTGGTTTTGTCACAAAAGGATATCAAAGCGTTAA 336 0.4107 MNFSEATMDRKKKVNRREEHEVLLKAACAARLFQLTRELGLKTHGETIEWLLDHVEPSIAATNGKGISSSSSLTCYVVVNSSSTLCEDKNDVGEGDEGEKGWFCHKRISKR* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2971 111 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 6 76 - -
Aev04g2971 111 Pfam TCP family transcription factor 7 81 IPR017887 -
Aev04g2971 111 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 6 76 IPR005333 GO:0003700
Aev04g2971 111 ProSiteProfiles TCP domain profile. 7 62 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2971 Aev-Chr4 29493226 29493561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2971 7 66 TCP Transcription Factor Family AT2G37000 61.667 5.19e-17 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev04g2971 TCP 2.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2971 - K16221 ahf:112736155 85.1149