Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2970 ATGAGTTCAGATAAAGTTCTCCTACCAAATTCTTCTCCGAAAAATCAACTAAGAGCTATGAATTTTTCTGAGGCCCATCCCCATCTTAAGACCACCAAGGACCGTCACAAAAAAGTAAATGGAAGAGAACGACGCATTCTCTTACCACCATTGTGTGCTGCACGTGTATTCCAACTCACGAATGAGTTGGGACACAAAACTCATGGTGATACCATTGAATGGCTATTACACCATGCTGAGCCCTCTATTGCCACAGTGATTGGCAAAGGAATTTCACCATCATCATCTTCTCAACATTCTTCTATTACTGTTAATGCATCATTAACATCATATGGTGATAAAGGTGATGATGGAGAAGACATGGAGAATGAAAATGGGTTATTTTTGTCACAAAAGGAGATTGACGTGTTAGCAAGTATTGGTGCTAGGTTTTCTGATAATGAGATAGCAACGATCCAATCTATGTTAAAGAAGTTCACTTAA 483 0.3892 MSSDKVLLPNSSPKNQLRAMNFSEAHPHLKTTKDRHKKVNGRERRILLPPLCAARVFQLTNELGHKTHGDTIEWLLHHAEPSIATVIGKGISPSSSSQHSSITVNASLTSYGDKGDDGEDMENENGLFLSQKEIDVLASIGARFSDNEIATIQSMLKKFT* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2970 160 Pfam TCP family transcription factor 31 117 IPR017887 -
Aev04g2970 160 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 26 157 - -
Aev04g2970 160 ProSiteProfiles TCP domain profile. 32 86 IPR017887 -
Aev04g2970 160 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 157 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2970 Aev-Chr4 29490788 29491270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2970 30 112 TCP Transcription Factor Family AT1G72010 60.241 8.52e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev04g2970 TCP 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2970 - K16221 ahf:112736155 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1932 10 20744268 20744849 Aev04g2970 04 29490788 29491270 PCT