Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2959 ATGGTCATGTCCAAGTTGAGAGTTATAAGAAGCATAAAAAAGAAAAGTGTGATAAGTGGAATTTTGAAGCTGAAGATTGTCTCAAAAAAGCTTCAAAAGGGTCTCTTACTTGTTAATAAGTCATCAAGTTGTTACTACAAATGTGATGATGATTGTGAAGAAGGGTGTGATAACACAAAATCATCAGTGGCAGAGGATGTGAAAGCAGGGCATTTTGCTGTGATTGCTCATGATGGTGATGAGGGACTAATAAAGAGATTTGTTGTGCCATTGAATTGTTTGAAAAATCCAAGATTCTTGAGGTTGTTGGAGAGAGCAGCTGAAGAGTATGGTTTTGATCAAGATGGTGCAATAACCATTCCTTGCAGGCCTTGTGAGCTTCAGATGTTGTTGGCTCAGCAATGGCAACAACATGGAGACTCTGAAGATCATGGAATTGGTTTCATCTCATCATGTGATAATGCAATGGTTAAAAGCTACTGA 483 0.383 MVMSKLRVIRSIKKKSVISGILKLKIVSKKLQKGLLLVNKSSSCYYKCDDDCEEGCDNTKSSVAEDVKAGHFAVIAHDGDEGLIKRFVVPLNCLKNPRFLRLLERAAEEYGFDQDGAITIPCRPCELQMLLAQQWQQHGDSEDHGIGFISSCDNAMVKSY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2959 160 Pfam Auxin responsive protein 50 131 IPR003676 GO:0009733
Aev04g2959 160 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 31 140 - -
Aev04g2959 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2959 Aev-Chr4 29359605 29360087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2959 37 131 Calmodulin-binding Proteins AT3G43120 40.000 7.63e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2959 - K14488 qsu:112024380 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1941 10 20803328 20803819 Aev04g2959 04 29359605 29360087 PCT