Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2954 ATGCAGAAATCCGGCTACGGCAGCGACGGCATTTACAGGTCCCTAAGACCTTCCATCACCCTCCCCAACAACCCCAAAACATCCCTAACCTCCTTCCTCTTCCACCAAACCTCACCCTTCCCTTCCAAACCCGCCCTCATCGACGCCACCACCTCCGAAACCCTCACCTTCCACCACCTCAAAACCACCGTCACAAAACTCTCCCACGGCCTCCTCCGCCACGGCCTCACCAAAAACGACGTCGTCCTCATCTTCGCCCCTAACAGCATCCACTTCCCACTCTTCTTCCTCGCCGCCACCGCCATCGGCGCCATCGTCTCCACCGTAAACCCTCTCTACACCGTCTCCGAGCTCTCCAAACAAATCAACGACTCCAACCCCAAGCTCCTCATCACAACCCCAGAACTCTTGGAAAAAGTCAAATCCTTCAAGTTCGACCTCCCCACAGTTCTCCTTGGCTCCGAAACGACGAGCTCGGAGTTCACTACTCAAAGTCGTTTAATCGAATTAGCCCCGTCAACGACGGAATTACCAGTAAACGACGTTAACCAGAACGATACGGCAGCGTTATTGTACTCTTCTGGGACCACGGGGGTAAGCAAGGGTGTGATCCTCACGCACCGGAACTTCATTGCAGCGTCATTGTCGATTGGGATGGATGATGACGTGGCAGGGGACGCGAACGACAGTATCTTCCTCTGCGTTTTGCCGATGTTCCATGTGTTCGCTCTGGCGGTGATCTTGTACTCGCAGCTACGGAGAGGGATCACGATGGTGTCGTTGGGGAGGTTCGAGTTCGAAGCGTTTCTGAAGGCAATTGAGAAGTTCAGGGTAACGGATATTTGGGTGGTGCCTCCCATTGTTCTTGCTCTGGCGAAACAGAGTGTGGTTCAGAATTATGACCTTTCTTCCTTGAGGAGGATTGGTTCTGGTGCTGCTCCTCTTGGGAAGGACTTGATGAAAGATTGTGCGAGGCGTTTACCTCATCTTACTCTGATTCAGGGGTATGGTATGACAGAAACTTGTGGTATTATTTCCGTGGAGAATCCAAGAACAGGGATTCGTCATAGTGGCTCAGCAGGAATGCTGGCTGCAAGCATCGACGCTCGAATAGTGAGCGTGGATACACAGGAGTCCCTCCCTCCAACACAGTTGGGGGAGATATTGGTACGGGGTGCTAATATGATGAAAGGTTATTATAAAAATCCAGAGGCCACAAAATTGACTATAGATAAGCAGGGGTGGGTACATACTGGTGATCTTGGATATTTTGATGAGGAAGGTCAGCTTTTTGTTGTTGACCGAATCAAAGAACTGATCAAGTATAAAGGTTTTCAGATTGCACCAGCAGAACTTGAAGGGCTTCTTGTTTCTCACCCTGAAATACTAGATGCTGTTGTCATCCCATATCCGGATGATGAGGCTGGTGAGGTTCCAGTTGCCTGTGTTGTTCGTTCGCCAAACAGTTCGCTGACTGAAGAAGATGTTCAGAAGTTTATTGCTGATCAGGTTGCACCTTACAAAAGATTGCGAAGAGTGACCTTCATAAGTGCTATTCCTAAGACAGCTTCTGGAAAAATTCTCAGAAGAGAGCTTATTGCAAAAGCACGATCCAAAATGTAA 1623 0.496 MQKSGYGSDGIYRSLRPSITLPNNPKTSLTSFLFHQTSPFPSKPALIDATTSETLTFHHLKTTVTKLSHGLLRHGLTKNDVVLIFAPNSIHFPLFFLAATAIGAIVSTVNPLYTVSELSKQINDSNPKLLITTPELLEKVKSFKFDLPTVLLGSETTSSEFTTQSRLIELAPSTTELPVNDVNQNDTAALLYSSGTTGVSKGVILTHRNFIAASLSIGMDDDVAGDANDSIFLCVLPMFHVFALAVILYSQLRRGITMVSLGRFEFEAFLKAIEKFRVTDIWVVPPIVLALAKQSVVQNYDLSSLRRIGSGAAPLGKDLMKDCARRLPHLTLIQGYGMTETCGIISVENPRTGIRHSGSAGMLAASIDARIVSVDTQESLPPTQLGEILVRGANMMKGYYKNPEATKLTIDKQGWVHTGDLGYFDEEGQLFVVDRIKELIKYKGFQIAPAELEGLLVSHPEILDAVVIPYPDDEAGEVPVACVVRSPNSSLTEEDVQKFIADQVAPYKRLRRVTFISAIPKTASGKILRRELIAKARSKM* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2954 540 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Aev04g2954 540 Pfam AMP-binding enzyme 35 442 IPR000873 -
Aev04g2954 540 Gene3D - 438 539 IPR045851 -
Aev04g2954 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 539 - -
Aev04g2954 540 CDD 4CL 21 532 - -
Aev04g2954 540 Gene3D - 9 437 IPR042099 -
Aev04g2954 540 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 539 - -
Aev04g2954 540 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Aev04g2954 540 SUPERFAMILY Acetyl-CoA synthetase-like 17 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2954 Aev-Chr4 29326002 29330109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2954 1 540 Monolignol Biosynthesis Gene Families AT4G05160 66.179 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2954 K01904 - gmx:100808944 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2954 04 29326002 29330109 Aev04g2954 04 29326002 29330109 ECH