Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2951 ATGGGAAGAGCTCCTTGTTGTGACAAGGCAAATGTTAAGAGAGGGCCATGGTCTCCAGAAGAAGACTCAAAGCTCAAAGACTACATAGAGAAACATGGCACTGGTGGCAATTGGATTGCTCTTCCTCACAAAGCTGGTCTAAAGAGATGTGGGAAAAGTTGCAGACTAAGATGGTTGAACTATTTGAGGCCTAACATTAAGCATGGAGAATTCTCTGAAGAGGAAGACAGAATTATTTGCAGCCTTTATGTTAATATTGGAAGCAGGTGGTCAATTATAGCAGCTCAGTTGCCAGGCAGGACTGACAATGATATAAAGAACTATTGGAACACAAAATTGAAGAAAAAACTGATGGCTTTGCTTCCTCATCAAAAAATGAAGCCTCCTCCAACATTTCCATCTTCTTCTAACCAAAACCAACCACCAAATCATTATTCTGCTTCATCATCAATGTACATAGACTACTTTGGCTCTTGTAATGACTATTACACCCCCGAAACCATGATCAATACTACTACTACCCTTGATGATCCCACCACTATTATTCCTTCAAGTGGTCATGACTATGCAATTCCAAGCACAATTTCTTCTTCTTCTCAACCCTTTTTCCAAAACCAATTAGACCAATCCATTATGGCTAGTGGTGGTGGTGTTAATTATTATAACAACATGCAATATAATTACTATTACCACAACCCCATTATGCTTGGAAGTGAAGGAGGAAGTTGTAGCACTTCCTCTGATGGTAGCTGCAGCCATGGCAGAGCAGAAACAATAATCAAGCAAGAGGCAGAAATGTATTGTGCTTATAATAATAATAATAATAATATGTCCAATGATTATTTTGGTCAAAGTCAAAGAAGAAGTAGCATTGGATAA 879 0.3857 MGRAPCCDKANVKRGPWSPEEDSKLKDYIEKHGTGGNWIALPHKAGLKRCGKSCRLRWLNYLRPNIKHGEFSEEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMALLPHQKMKPPPTFPSSSNQNQPPNHYSASSSMYIDYFGSCNDYYTPETMINTTTTLDDPTTIIPSSGHDYAIPSTISSSSQPFFQNQLDQSIMASGGGVNYYNNMQYNYYYHNPIMLGSEGGSCSTSSDGSCSHGRAETIIKQEAEMYCAYNNNNNNMSNDYFGQSQRRSSIG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2951 292 PANTHER OS09G0431300 PROTEIN 1 280 - -
Aev04g2951 292 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev04g2951 292 PANTHER TRANSCRIPTION FACTOR RAX3 1 280 - -
Aev04g2951 292 CDD SANT 16 62 IPR001005 -
Aev04g2951 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aev04g2951 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev04g2951 292 SMART sant 13 64 IPR001005 -
Aev04g2951 292 SMART sant 67 115 IPR001005 -
Aev04g2951 292 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev04g2951 292 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Aev04g2951 292 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aev04g2951 292 Gene3D - 7 68 - -
Aev04g2951 292 CDD SANT 70 111 IPR001005 -
Aev04g2951 292 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aev04g2951 292 Gene3D - 69 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2951 Aev-Chr4 29307191 29309053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2951 1 119 MYB Transcription Factor Family AT5G57620 89.916 1.36e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g2951 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2951 K09422 - gmx:100779186 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2951 04 29307191 29309053 Aev04g2951 04 29307191 29309053 ECH
Aev10g1943 10 20823451 20825135 Aev04g2951 04 29307191 29309053 PCT