Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2935 ATGGACCCAAATTATGTTCATCATGAACAGAGCACTACTCTGGCTCACATCAATGACTATGAGCTGCTGGATTTCATAGATGATCCAAACTTTGATCAATTCATCAATTTGATTCGTGGAGAGAACAAAGATGAAGATACTACTATTAGTAACTTTGATTATTCTAGCCTTATCAATGGTTCCTTAGTTGATAATAATAACCCCTTGATTTCATTCCCTCCAAATAATGCATTTGATCAATGTAATAATGTTTGTGATCCTAGCTCAACACTTAGCTCCTTCTCTTGTTTTGATGATGATGGGGAATTGAAGGGAGAAGAAGAATTAGGAGGAGAAGAAGAAGAAAATGATGATGAGGATTCTTCTGCAACAACCAATGCAACTACAAGTGGTAATAATACAAAATCTAGGCCTAAAACTGATAGGTCCAAGACTTTGATTTCAGAGAGGAGGAGAAGAGGCAGAATGAAGGAGAAGCTTTATGCATTGCGTTCTTTGGTTCCCAACATAACTAAGATGGATAAGGCCTCTATAATTGGAGATGCAGTTTCATATGTTCATGAGCTTCAAGCACAAGCTAAGAAGCTGAAGACAGAGGTTGCAGGACTAGAAGCATCCTTATTAGTCTCAGAAAAGTATCAAGGAACAATTCAAAACCCAATAAAGGTTCAATTCACCACCAACAACAATAACATCCTTCCAAATTGCAACAAGATTATCCAGCAGATGGACATGTTTCAAGTTGATGAAAGAGGGTTTTATGTGAAAATTGTGTGTAATAAAGGAGAAGGTGTGGCTTCCTCATTGTACAGGTCTCTTGAGTCTCTGGCAGGATTCAATGTTCAGAATTCTAACTTGGCCACAGCTTCTAACACTTTCTTATTTACATTTTTGTTGACTGTGAAAGGTTCTATGGCAGAGGTTAACCTGCCCAATTTGAGGTTATGGGTGACTGGGGCTTTTCTGAGCCAAGGATTTGAGTTCATACCATCTTTTCTACCTTGA 1005 0.3811 MDPNYVHHEQSTTLAHINDYELLDFIDDPNFDQFINLIRGENKDEDTTISNFDYSSLINGSLVDNNNPLISFPPNNAFDQCNNVCDPSSTLSSFSCFDDDGELKGEEELGGEEEENDDEDSSATTNATTSGNNTKSRPKTDRSKTLISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVSYVHELQAQAKKLKTEVAGLEASLLVSEKYQGTIQNPIKVQFTTNNNNILPNCNKIIQQMDMFQVDERGFYVKIVCNKGEGVASSLYRSLESLAGFNVQNSNLATASNTFLFTFLLTVKGSMAEVNLPNLRLWVTGAFLSQGFEFIPSFLP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2935 334 MobiDBLite consensus disorder prediction 102 151 - -
Aev04g2935 334 MobiDBLite consensus disorder prediction 137 151 - -
Aev04g2935 334 Gene3D - 131 206 IPR036638 GO:0046983
Aev04g2935 334 Coils Coil 186 206 - -
Aev04g2935 334 SMART finulus 146 195 IPR011598 GO:0046983
Aev04g2935 334 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 16 330 - -
Aev04g2935 334 MobiDBLite consensus disorder prediction 102 121 - -
Aev04g2935 334 MobiDBLite consensus disorder prediction 122 136 - -
Aev04g2935 334 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 330 - -
Aev04g2935 334 Pfam Helix-loop-helix DNA-binding domain 147 190 IPR011598 GO:0046983
Aev04g2935 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 205 IPR036638 GO:0046983
Aev04g2935 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2935 Aev-Chr4 29116478 29119168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2935 13 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 53.165 1.34e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g2935 HLH 3.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2935 - - gmx:100805451 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1952 10 20886641 20888187 Aev04g2935 04 29116478 29119168 PCT