Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2924 ATGGTTCGCCGAGCGCCGCCACAGACTCCGCCGCAGCCCAGCCCCATTGACGTCAAAATGTGGAGGGCTTGCGCCGGAGGCAGTGTTGGAACGCCGGAGGTGAACTCGAGGGTATACTACTTCCCTCAAGGTCACATGGAGCAGGCCTCTGCTCCACCGCCGAACCTTTCCCCTCCCATGAGGCCATTCCTCCTCTGCCGCATAACCGCGGTGAGTTTCTTGGCGGATCCCGACACCGATGAGGTATTCGCCAAGCTCATTCTCCATCCCATTACCATCACTACTCACCCTCTTCTTCACTCATCTTCTTCTGCCGGCGAGGCTCCGCCGGCTGCTGTTGCTGGCGATGACGGCGGCGATAAGATTGTTTCTTTCGCCAAGACTTTGACGCCGTCTGATGCCAACAACGGCGGGGGATTTTCCGTCCCTAGGCAGTGTGCGGAGGCGATATTCCCTCCGCTGAACTTCGAGGATGATCCGCCTGTCCAGAAGCTCTCCGTGACCGACGTCCATGGCGTCACGTGGGAGTTTCGCCACATATATCGCGGAACTCCCCGGCGCCACCTGCTCACCACGGGGTGGAGTAAGTTCGTGAACAGCAAGAGTCTCGTCTCCGACGACTCTGTCGTGTTCATGAAGGACGCCGGCGGGAGGATGTTCGTCGGAATCCGCCGTTCTCGGAATTCATCAAACCTTTCCTTTAAAGACGGCGGAAGCGACAAGATGCCGGAGTGGCTGGCGGATATCATCGGGCTGGAGAACACCGTCGACGCCGAGGAGGCGGCGAACAAGAAGACGACGAACGAGGAAGAGGAGGCGGCAGCGGAGGAGTTCGGGAGGGGGAGGCTATCAGCGAAGGCAGTGTCGGAGGCAATGGAGCTGGCGGGGCAGAACAAGCCATTCGAGGTGGTTTACTACCCTCGAATGGGGCGGTCGGAATTCGTGGTTCGAGCGGAGGTGGTGGACGAGTACATGAGCATGTGCTGGCGTCCAGGGATGAGGGTCAAGATGTCCAAGGAGAGCGAGGATTCCACCAGGGTGACGTGGCATCAGGGTGCGGTCTCTGCTGTCTGCACCAATGTCGACCCTCACTGGCCATCTTCTCCTTGGCGGATGCTTCAGATTTCATGGGATGAGCCTGAATCCATGAAGAACGCCAAGTTGGTGAGCCCATGGGAGATCATACCTCTTTCCAGCACACCTCCAATTCCAGTTCCACTTGCACCTCTAGTCATCCATGAAGTAGTTCCACCGCCTCCGAAGAAGTTCAGAGCAGATGAGGCAGACTTGTTCTACCGATTCTCTGATCATCATCCACCGACCATGGCACAAGTGAATCGGTCACTCTTGAGTTATGGTATCACTTATCCTCCTCCTCCTCCTGCTGGCATGCAGGGAGCCAGGCATGATCATCTACTTTCCGCACCTCCTTTACCCAGCAGCAATAGCAGCTCTTTTGTTCCTCATCATCATCCGTATATGGGGAACAATACAGCACAACCAAGGCCTAGTACTCTGCGCACAGAGATAAACATTTGGGGTCCTCTATCAGAGGATTTATCACCTGATAGCCAACGCAGTATGCTTTCCTCTGTCTCAGATTCTCCTCCCAACTGCGTGGTGAATAAAATTGCTGCTGGGTCTGGTTCAATTCGGCTATTTGGTGCAATCATTCAAAGAGAAAAGGCAGGTGATGATACTGGAACTCATGCCAAAGACCCTCACCATCAATGA 1734 0.5554 MVRRAPPQTPPQPSPIDVKMWRACAGGSVGTPEVNSRVYYFPQGHMEQASAPPPNLSPPMRPFLLCRITAVSFLADPDTDEVFAKLILHPITITTHPLLHSSSSAGEAPPAAVAGDDGGDKIVSFAKTLTPSDANNGGGFSVPRQCAEAIFPPLNFEDDPPVQKLSVTDVHGVTWEFRHIYRGTPRRHLLTTGWSKFVNSKSLVSDDSVVFMKDAGGRMFVGIRRSRNSSNLSFKDGGSDKMPEWLADIIGLENTVDAEEAANKKTTNEEEEAAAEEFGRGRLSAKAVSEAMELAGQNKPFEVVYYPRMGRSEFVVRAEVVDEYMSMCWRPGMRVKMSKESEDSTRVTWHQGAVSAVCTNVDPHWPSSPWRMLQISWDEPESMKNAKLVSPWEIIPLSSTPPIPVPLAPLVIHEVVPPPPKKFRADEADLFYRFSDHHPPTMAQVNRSLLSYGITYPPPPPAGMQGARHDHLLSAPPLPSSNSSSFVPHHHPYMGNNTAQPRPSTLRTEINIWGPLSEDLSPDSQRSMLSSVSDSPPNCVVNKIAAGSGSIRLFGAIIQREKAGDDTGTHAKDPHHQ* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2924 577 MobiDBLite consensus disorder prediction 476 503 - -
Aev04g2924 577 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
Aev04g2924 577 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 563 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev04g2924 577 MobiDBLite consensus disorder prediction 260 280 - -
Aev04g2924 577 Coils Coil 249 276 - -
Aev04g2924 577 Gene3D - 122 226 IPR015300 -
Aev04g2924 577 Pfam Auxin response factor 291 374 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev04g2924 577 CDD B3_DNA 124 225 IPR003340 GO:0003677
Aev04g2924 577 Gene3D - 329 401 - -
Aev04g2924 577 MobiDBLite consensus disorder prediction 474 503 - -
Aev04g2924 577 PANTHER AUXIN RESPONSE FACTOR 9 563 - -
Aev04g2924 577 MobiDBLite consensus disorder prediction 518 535 - -
Aev04g2924 577 Pfam B3 DNA binding domain 125 226 IPR003340 GO:0003677
Aev04g2924 577 MobiDBLite consensus disorder prediction 260 279 - -
Aev04g2924 577 SMART B3_2 125 227 IPR003340 GO:0003677
Aev04g2924 577 MobiDBLite consensus disorder prediction 516 535 - -
Aev04g2924 577 SUPERFAMILY DNA-binding pseudobarrel domain 120 227 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2924 Aev-Chr4 29040109 29041965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2924 16 562 B3 DNA Binding Superfamily AT1G77850 44.086 3.15e-131 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev04g2924 B3 3.2e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2924 - - aprc:113852457 473.396