Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2923 ATGGTTGAAATGGTTAGGATTGGGAGTGGATTCTCCAATATGATGTTCTGGATTCTAATTGAAGAACTCCATTGCGTAGAGACTGGTGAGATGAATGACCTTGTTTTTCTAAGGCTCTTGGAAACTGTGGAATCCAAGGTTCTGAAAACCGGACTGGACATTGAACCGGACGAGGGAGGAGTTCAGAGGTTTAGGCTTGGTTTGTCATCCAGAAGGCGGGGAGATGGACGAAGCGGCAACACCCAGTCATCTGCACTCTTGCAAATGTGGCGAGAGATTGAGGATGAACATGCGGTGAATCAGGTTCAAGGAAGGCCTGGTGAAGTACTACTTGAACAGAGGAGTACTGGTGGGTTGATTTCTGACCTCTCACAGGAAGATTCACCAGGTAGCCATGAGAGAGGACGGAGGCATATGATGGAAGATGCGCTATCAGGTGACTTAGAGTCTGAAACATGGTCACAGTCACAGAGTCAGCATGAATCCCATGATGATCATGAGGATTTTAACAATTCTAGCTGTGATAACTCATCTGATTTGGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTTAGGGAATGGATGAATAGTGGTGCTAGGGACCATGGATCAAACATTTCTAGGAGAAGTAGCAGTTCAAGGGGAGAATGGCTTGGTGAAAATGAACAGGAAAGGGTGAGAATCATAAGGGAGTGGGTACAAATGAGTAGCCAACAAGCTCAGCTGCGAGGTGTTTCACCTGGGGAAACCAGGGAAGAACAATCTGCTGAAATTGATACTCAAATTGAACGTATTCGTGATGGATTGATTGTTAACCAGAGTGAGGGCCAGACTGAGCATATACGCAGGGGTATCCGTAAATTATGTGGTAGACAGGTCATGCTTGATATGCTGAAGAAGGCTGAAAGGGAAAGGCAAAGAGAAATTCAGGAGTTGTTGGACCATCGTGCAGTATCTCATTTCCCCCATCGTAATCGCATTCAGGCATTGCTTAGAGGCAGGTTCTTGAGAAATGATAGATCTGTTGATAACAACAGGTCCACTTCTGTTGCAGAAAGTGAATTAGGCTTATTGCGGCAAAGACAAACTGTTTCAGGCCTAAGGGAAGGATTCTTCTCTGGAAAGGACAAAACTGGTTGCAGCCAAGTAACCAAAGCCCTATGTGATACCTTATCTAACAGTGATATTGATTTCAATACAAATGAACAGACTGGTGCCACCAGTTCACATATGATCGCAAATGTTCACTCTAAGCAGTCTGAACCCAATAACAGGGGACATAGTGGACCTGGGATATCAGGCAGCCAGAATTGTTTGCAGGAAACCATTCGTGAGAATCTAGATTGCCAAGACACTGCTGCTCATGCTGAATCAGTTGATCAGCAGTCATCATCCATTTTTGTTGTTGAAAGAAGAGACAACACTGGGCTAAATGATGTGACGCCAGTTGAAGATACTGCTAGTGAACTAATGCAACAAAGTTTGCAAACTGAAGCTTCAGAGCATAGTACTATACAGGAATTCACTGAGGCATATAATGATCAATCTCCATTGGGTGATATAAGTAATGATGAAAACAATTCATCAAACCATAACAATAATGTGGAGGACAATGTTGTTGATGATGTGAATTGGAATGAATCTGCTGCTCCAGTAGAACATCGGGAAGAAGTTATTGAAAATGAAGGAAGTGAATGGCATCAGAGTAACAGTGAATGGAGAAATAGCACTGATGAAAGTGTGGATAATAATCCGCTCAGTAGTACAGCAATTGAGTGGCCTGATAACAATTTGGGAAATGAGGATGAAGAAAACTCTCATCTGCATGAACCTGAAGTGTGGCAGGAAGATGGTGGCTTCCAAGAGGCTGTAGAAAATTGGTTGGGAGGACCTTCTGATCTTGAAAATGCTCCAGTTAGTAGAATTCATGGTTTTTATTTTCCTGACGATGACAATGTATATAGTGTTGAGCTCAGGGAACTGCTTAATAGAAGAAGTGTCTCTAACCTCCTTAGGAGCAGTTTCCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAGGGTCATGCTCAGGTTGAGTGGGAGCAGCAAGAAACAACCCATTCTGCTGCTTCTGTAGAACAGGACCTTGAGCAGCAGAGTAGGAATCAGATTGTCGATCAGGAGGGTACTGTTAATAATCCACTTGATCTACCCTCCTCTTTACCTGTACCTCCTCCTCTGCCTATTTGGGACCGGCATCCTCACCGTGACAATTGGTCACAGAATGACATAAATAGTCAGCGTCTAGGAATTGATTGGGAGGTTATTAATGACTTGAGAATTGACATGGCTAGGCTACAACGACGGATGAATAACATGCAAAGAATGCTGGAAGCCTGTATGGATATGCAGCTGGAGTTGCAGCGATCAATAAGACAAGAAGTTTCTGCTGCCTTGAATCGCTCGACTGATTCATCAGGAACAAACGACTGCGACTCGCCGGATGATGAATCTAAATGGGAGTCTGTGCGGAAAGGGCTTTGCTGTATATGCTGTGAAAGCAATATTGATTCTTTGTTGTACAGATGTGGGCACTTGTGTACATGTTCAAAGTGTGCCAATGAGTTGCTTCAAAGTAGAAGGAAGTGTCCAATGTGTCAAGCACCCGTCGTGGAGGTGATACGTGCCTATTCTATACTATAA 2697 0.4364 MVEMVRIGSGFSNMMFWILIEELHCVETGEMNDLVFLRLLETVESKVLKTGLDIEPDEGGVQRFRLGLSSRRRGDGRSGNTQSSALLQMWREIEDEHAVNQVQGRPGEVLLEQRSTGGLISDLSQEDSPGSHERGRRHMMEDALSGDLESETWSQSQSQHESHDDHEDFNNSSCDNSSDLGEVERERVRQIFREWMNSGARDHGSNISRRSSSSRGEWLGENEQERVRIIREWVQMSSQQAQLRGVSPGETREEQSAEIDTQIERIRDGLIVNQSEGQTEHIRRGIRKLCGRQVMLDMLKKAERERQREIQELLDHRAVSHFPHRNRIQALLRGRFLRNDRSVDNNRSTSVAESELGLLRQRQTVSGLREGFFSGKDKTGCSQVTKALCDTLSNSDIDFNTNEQTGATSSHMIANVHSKQSEPNNRGHSGPGISGSQNCLQETIRENLDCQDTAAHAESVDQQSSSIFVVERRDNTGLNDVTPVEDTASELMQQSLQTEASEHSTIQEFTEAYNDQSPLGDISNDENNSSNHNNNVEDNVVDDVNWNESAAPVEHREEVIENEGSEWHQSNSEWRNSTDESVDNNPLSSTAIEWPDNNLGNEDEENSHLHEPEVWQEDGGFQEAVENWLGGPSDLENAPVSRIHGFYFPDDDNVYSVELRELLNRRSVSNLLRSSFRESLDQLIQSYVERQGHAQVEWEQQETTHSAASVEQDLEQQSRNQIVDQEGTVNNPLDLPSSLPVPPPLPIWDRHPHRDNWSQNDINSQRLGIDWEVINDLRIDMARLQRRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTDSSGTNDCDSPDDESKWESVRKGLCCICCESNIDSLLYRCGHLCTCSKCANELLQSRRKCPMCQAPVVEVIRAYSIL* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2923 898 MobiDBLite consensus disorder prediction 117 136 - -
Aev04g2923 898 Pfam Zinc finger, C3HC4 type (RING finger) 843 890 - -
Aev04g2923 898 SUPERFAMILY RING/U-box 845 891 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 199 221 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 814 836 - -
Aev04g2923 898 CDD mRING-HC-C3HC5_NEU1 846 884 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 144 183 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 418 437 - -
Aev04g2923 898 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 832 896 IPR013083 -
Aev04g2923 898 MobiDBLite consensus disorder prediction 565 596 - -
Aev04g2923 898 PANTHER PROTEIN, PUTATIVE-RELATED 69 897 - -
Aev04g2923 898 Coils Coil 292 319 - -
Aev04g2923 898 Coils Coil 774 801 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 201 218 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 552 609 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 515 538 - -
Aev04g2923 898 MobiDBLite consensus disorder prediction 158 172 - -
Aev04g2923 898 ProSiteProfiles Zinc finger RING-type profile. 846 885 IPR001841 -
Aev04g2923 898 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 69 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2923 Aev-Chr4 29019776 29024781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2923 846 892 C3H Transcription Factor Family AT3G06140 42.553 1.74e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2923 - - gmx:100801329 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2923 04 29019776 29024781 Aev04g2923 04 29019776 29024781 ECH
Aev10g1960 10 20940656 20944098 Aev04g2923 04 29019776 29024781 ECH
Aev10g1960 10 20940656 20944098 Aev04g2923 04 29019776 29024781 PCT