Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2922 ATGATGGAATTTCACAATCGTAGACTCCTCCTCCTGAACGAAGATGTCCCCGCCGCCGCCACCACCACCATCCCACCACCACCAATGTTCCTCAGATCCTCTTCACTGGAACTACCTCCTCGCCCCATTTTCACTTCAAACCTCGCCTACGCTTTCCTATTCCTCTTCACCGCCTTTTTCTTCCTCGCCTTCATCCTCCTCTACATCCGCCACTTCTCCAGCAACTTCGGATCCTCCTCCGGCGCCTCCCTCTGCCGCCGTAACAGCTCCTCCTCCGCCGTGAAGCCACTGCCGGAGCTGCCGTACCGCGGGGACTCGAAGCCGCAGCAGGCGGAGTGCGCTATATGCCTTGACGAGTTTCGCGAGGGTATAATGGTAAAAATGATACCGTACTGCAAGCACGTGTTCCACCCAGAGTGTATTGACACGTGGCTAGTGGAGCACGTGACTTGCCCTGTTTGCCGGTGTGAGAAGATTATTTGTGAGAGTGGGAAAGTTGCGTGTGAGCGCGTGGAGGCGCGTGGGGATGAAGGAGAAGAAACGGTGGTTGAGATTAGAGTAAGGGATAACAGTAATAATAGTAGTAATAGAGGGTCCAGGTTTGGGTTAAGGAGGTCGATGAGTTTTTGA 630 0.5397 MMEFHNRRLLLLNEDVPAAATTTIPPPPMFLRSSSLELPPRPIFTSNLAYAFLFLFTAFFFLAFILLYIRHFSSNFGSSSGASLCRRNSSSSAVKPLPELPYRGDSKPQQAECAICLDEFREGIMVKMIPYCKHVFHPECIDTWLVEHVTCPVCRCEKIICESGKVACERVEARGDEGEETVVEIRVRDNSNNSSNRGSRFGLRRSMSF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2922 209 MobiDBLite consensus disorder prediction 190 209 - -
Aev04g2922 209 SUPERFAMILY RING/U-box 98 158 - -
Aev04g2922 209 SMART ring_2 113 154 IPR001841 -
Aev04g2922 209 PANTHER RING FINGER DOMAIN-CONTAINING 44 188 - -
Aev04g2922 209 CDD RING-H2_PA-TM-RING 112 155 - -
Aev04g2922 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 159 IPR013083 -
Aev04g2922 209 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 44 188 - -
Aev04g2922 209 Pfam Ring finger domain 112 155 IPR001841 -
Aev04g2922 209 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2922 Aev-Chr4 29016497 29017126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2922 46 209 C3H Transcription Factor Family AT2G27940 34.031 1.75e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2922 - K10664 aip:107634124 166.777